Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | QBS29_RS11535 | Genome accession | NZ_CP121794 |
| Coordinates | 1746609..1746926 (-) | Length | 105 a.a. |
| NCBI ID | WP_266110146.1 | Uniprot ID | - |
| Organism | Aeromonas caviae strain FIONA 16800 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1741609..1751926
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QBS29_RS11515 | - | 1742000..1742674 (-) | 675 | WP_039041329.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| QBS29_RS11520 | - | 1742950..1743921 (+) | 972 | WP_266110147.1 | response regulator | - |
| QBS29_RS11525 | - | 1743992..1745389 (-) | 1398 | WP_029314796.1 | peptide MFS transporter | - |
| QBS29_RS11530 | galU | 1745603..1746514 (-) | 912 | WP_010675542.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| QBS29_RS11535 | comEA | 1746609..1746926 (-) | 318 | WP_266110146.1 | ComEA family DNA-binding protein | Machinery gene |
| QBS29_RS11540 | cysQ | 1747153..1747849 (+) | 697 | Protein_1656 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| QBS29_RS11545 | - | 1747936..1748232 (-) | 297 | WP_010675539.1 | YciI family protein | - |
| QBS29_RS11550 | - | 1748257..1748808 (-) | 552 | WP_039041321.1 | septation protein A | - |
| QBS29_RS11555 | - | 1748914..1750419 (-) | 1506 | WP_103243667.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| QBS29_RS11560 | - | 1750611..1751243 (+) | 633 | WP_266110144.1 | hemolysin III family protein | - |
Sequence
Protein
Download Length: 105 a.a. Molecular weight: 10946.85 Da Isoelectric Point: 10.1059
>NTDB_id=814232 QBS29_RS11535 WP_266110146.1 1746609..1746926(-) (comEA) [Aeromonas caviae strain FIONA 16800]
MNKKTLIAALLLGCLPLLSQPLLAADKAATKPVAATQVKESGKINLNTASAGELTALKGIGEKKAQAIIDHREKQGKFTS
VDQLADVSGIGPATLEANRDMIIVK
MNKKTLIAALLLGCLPLLSQPLLAADKAATKPVAATQVKESGKINLNTASAGELTALKGIGEKKAQAIIDHREKQGKFTS
VDQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 318 bp
>NTDB_id=814232 QBS29_RS11535 WP_266110146.1 1746609..1746926(-) (comEA) [Aeromonas caviae strain FIONA 16800]
ATGAACAAGAAAACCCTGATCGCCGCACTGCTGCTGGGCTGCCTCCCCCTGTTGAGCCAACCTCTGCTGGCCGCCGACAA
GGCGGCGACCAAGCCTGTGGCCGCCACCCAAGTCAAGGAGAGCGGCAAGATCAATCTCAATACCGCCAGTGCCGGCGAGC
TCACCGCCCTGAAGGGCATTGGCGAGAAGAAGGCACAGGCCATCATCGACCACAGGGAGAAGCAGGGCAAGTTCACCTCC
GTCGATCAACTGGCGGACGTCAGTGGCATCGGACCTGCCACGCTGGAAGCAAACCGGGACATGATTATCGTCAAGTAA
ATGAACAAGAAAACCCTGATCGCCGCACTGCTGCTGGGCTGCCTCCCCCTGTTGAGCCAACCTCTGCTGGCCGCCGACAA
GGCGGCGACCAAGCCTGTGGCCGCCACCCAAGTCAAGGAGAGCGGCAAGATCAATCTCAATACCGCCAGTGCCGGCGAGC
TCACCGCCCTGAAGGGCATTGGCGAGAAGAAGGCACAGGCCATCATCGACCACAGGGAGAAGCAGGGCAAGTTCACCTCC
GTCGATCAACTGGCGGACGTCAGTGGCATCGGACCTGCCACGCTGGAAGCAAACCGGGACATGATTATCGTCAAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
50 |
100 |
0.505 |
| comEA | Vibrio cholerae strain A1552 |
50 |
100 |
0.505 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
47.664 |
100 |
0.486 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
44.144 |
100 |
0.467 |
| comEA | Legionella pneumophila strain ERS1305867 |
45 |
95.238 |
0.429 |
| comEA | Legionella pneumophila str. Paris |
45 |
95.238 |
0.429 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
43.75 |
91.429 |
0.4 |
| comEA | Acinetobacter baylyi ADP1 |
47.561 |
78.095 |
0.371 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
52.055 |
69.524 |
0.362 |