Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   RMP67_RS06075 Genome accession   NZ_CP135087
Coordinates   1210816..1211481 (+) Length   221 a.a.
NCBI ID   WP_313921426.1    Uniprot ID   -
Organism   Streptococcus suis strain ID26102     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1205816..1216481
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RMP67_RS06045 (RMP67_06045) - 1206743..1206883 (+) 141 WP_044679687.1 hypothetical protein -
  RMP67_RS06050 (RMP67_06050) - 1206896..1207291 (+) 396 WP_172016978.1 NisI/SpaI family lantibiotic immunity lipoprotein -
  RMP67_RS06055 (RMP67_06055) - 1207314..1208066 (+) 753 WP_029173099.1 ABC transporter ATP-binding protein -
  RMP67_RS06060 (RMP67_06060) - 1208067..1210037 (+) 1971 WP_313921425.1 FtsX-like permease family protein -
  RMP67_RS06065 (RMP67_06065) relB 1210273..1210524 (+) 252 WP_024380669.1 type II toxin-antitoxin system RelB family antitoxin -
  RMP67_RS06070 (RMP67_06070) - 1210508..1210774 (+) 267 WP_024405694.1 type II toxin-antitoxin system RelE/ParE family toxin -
  RMP67_RS06075 (RMP67_06075) braR 1210816..1211481 (+) 666 WP_313921426.1 response regulator transcription factor Regulator
  RMP67_RS06080 (RMP67_06080) - 1211478..1212419 (+) 942 WP_313921427.1 sensor histidine kinase -
  RMP67_RS06085 (RMP67_06085) - 1212495..1214003 (+) 1509 WP_313921428.1 phosphomannomutase/phosphoglucomutase -
  RMP67_RS06090 (RMP67_06090) xerS 1214073..1215143 (-) 1071 WP_313921429.1 tyrosine recombinase XerS Machinery gene
  RMP67_RS06095 (RMP67_06095) - 1215309..1215830 (-) 522 WP_313921430.1 AAA family ATPase -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25460.22 Da        Isoelectric Point: 4.7736

>NTDB_id=808844 RMP67_RS06075 WP_313921426.1 1210816..1211481(+) (braR) [Streptococcus suis strain ID26102]
MKKEKIYIVEDDEMIVQLLKQHLGKSYQVESVQNFRAVSQEVVEIKPDLVLMDINLPYYNGFYWTTEIRKTMTMPIIFIS
SSDDEMNAVMAMNMGGDDFVSKPFSLGILDAKIGAFLRRVNQFSKSSDLSIDQFQLSLDGRFSNESEQVQLSPTETKILS
ALLERQGQIVSKDELLEKLWENEEFIDQNTLNVNMTRLRKKVSEVGFERIHTVRGVGYLVK

Nucleotide


Download         Length: 666 bp        

>NTDB_id=808844 RMP67_RS06075 WP_313921426.1 1210816..1211481(+) (braR) [Streptococcus suis strain ID26102]
ATGAAAAAAGAAAAGATTTATATTGTTGAAGATGATGAGATGATTGTCCAGCTCTTGAAGCAGCATTTGGGAAAATCTTA
TCAGGTAGAAAGTGTGCAGAATTTCCGAGCTGTCAGTCAGGAAGTTGTGGAAATCAAACCAGACTTAGTGCTGATGGACA
TTAACTTGCCCTATTACAACGGTTTTTATTGGACAACGGAAATCCGTAAAACCATGACCATGCCAATTATCTTTATCTCC
TCTAGCGATGATGAGATGAATGCGGTCATGGCCATGAACATGGGTGGCGATGATTTTGTTTCTAAGCCTTTTTCACTAGG
GATTTTGGATGCCAAAATCGGAGCCTTCCTGCGTCGGGTTAATCAATTCAGCAAATCGAGCGATTTGTCTATCGACCAGT
TCCAGCTTAGTTTGGACGGGCGATTTTCAAACGAATCAGAACAGGTTCAATTATCTCCAACAGAAACCAAGATTTTGTCC
GCCTTACTAGAAAGACAAGGGCAGATTGTCAGCAAGGATGAACTCTTGGAAAAACTCTGGGAAAATGAAGAATTTATCGA
CCAGAATACGCTCAATGTAAACATGACCAGACTGCGTAAGAAGGTGAGCGAAGTCGGGTTTGAACGAATTCATACGGTTC
GTGGCGTGGGGTACTTGGTCAAATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-219)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

47.727

99.548

0.475