Detailed information NTG0808773

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: P4831_RS06410
• Genome accession: NZ_CP120842
• Coordinates: 1247353..1248201 (+)
• Length: 282 a.a.
• NCBI ID: WP_023164171.1
• Uniprot ID: -
• Organism: Lactococcus lactis strain ZFM559
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1242353..1253201

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P4831_RS06385	ilvN	1243110..1243586 (+)	477	WP_010905839.1	acetolactate synthase small subunit	-
P4831_RS06390	ilvC	1243632..1244654 (+)	1023	WP_003131136.1	ketol-acid reductoisomerase	-
P4831_RS06395	ilvA	1244710..1245960 (+)	1251	WP_023164169.1	threonine ammonia-lyase IlvA	-
P4831_RS06400	budA	1246076..1246786 (+)	711	WP_003131140.1	acetolactate decarboxylase	-
P4831_RS06405	-	1246827..1247207 (+)	381	WP_023164170.1	RidA family protein	-
P4831_RS06410	dprA	1247353..1248201 (+)	849	WP_023164171.1	DNA-processing protein DprA	Machinery gene
P4831_RS06415	topA	1248462..1250594 (+)	2133	WP_003131148.1	type I DNA topoisomerase	-
P4831_RS06420	trmFO	1250666..1252009 (+)	1344	WP_003131150.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
P4831_RS06425	xerS	1252054..1253124 (-)	1071	WP_003131037.1	tyrosine recombinase XerS	-

Sequence

Protein

• Length: 282 a.a.
• Molecular weight: 32149.20 Da
• Isoelectric Point: 9.5086

>NTDB_id=808773 P4831_RS06410 WP_023164171.1 1247353..1248201(+) (dprA) [Lactococcus lactis strain ZFM559]
MITNFDLYRWKKASMTNLGVNKLLKFFHRYDKKISLRQMGQVAQLKSIPNFIEQYKNQDVSKLREEYKIYPSFSLLDEIY
PERLKEIYNPPVLLFYQGDIRLLKTPKLAFVGSRQASSQGIKAVQKIVTELNQNFTIVSGLAKGIDTASHLSAIKNKIPT
IAVIGTGLDIFYPLENRKIQEYLAKNQLILSEYSVGEKPLRYHFPERNRIIAGLSHGVVVIEAKLRSGSLITCERALEEG
RDIFAVPGNIADGFSDGCNHLIQQGAKLIYQAQDILEEYLYD

Nucleotide

• Length: 849 bp

>NTDB_id=808773 P4831_RS06410 WP_023164171.1 1247353..1248201(+) (dprA) [Lactococcus lactis strain ZFM559]
ATGATAACAAATTTTGATTTATATCGTTGGAAAAAAGCTAGCATGACCAATTTAGGAGTAAATAAACTTTTAAAATTTTT
TCATAGATATGATAAAAAAATAAGTTTAAGACAAATGGGACAAGTAGCACAACTTAAATCAATTCCCAACTTTATTGAAC
AATATAAAAATCAAGACGTAAGTAAACTGAGAGAAGAGTATAAAATATACCCATCATTTTCTCTTCTTGATGAAATTTAT
CCCGAAAGGCTCAAGGAAATTTACAATCCACCGGTTCTATTATTTTATCAAGGAGATATAAGACTCTTAAAAACTCCTAA
ATTAGCTTTTGTTGGTAGTCGACAAGCAAGCTCACAAGGAATTAAAGCCGTTCAAAAAATTGTGACAGAGTTGAACCAAA
ATTTTACGATTGTCAGCGGACTCGCTAAAGGAATTGATACAGCAAGTCATCTCTCTGCCATTAAAAATAAAATCCCTACA
ATTGCAGTTATCGGTACAGGCTTAGATATCTTTTATCCTTTAGAAAATCGAAAAATTCAAGAATATCTTGCTAAAAACCA
ACTCATACTATCAGAATATTCAGTCGGAGAAAAACCACTTCGCTATCATTTTCCTGAACGCAATCGTATCATTGCGGGAC
TTTCACATGGTGTAGTAGTGATAGAAGCAAAGTTACGAAGTGGTAGTTTAATTACTTGTGAACGCGCTCTGGAAGAAGGA
AGAGATATTTTCGCTGTACCAGGAAACATAGCAGATGGATTTTCAGATGGCTGTAATCATCTAATACAACAAGGAGCAAA
ATTAATCTATCAAGCCCAAGATATCTTAGAAGAATATTTGTATGATTAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (2-63)

• DNA recombination-mediator protein A (DNA_processg_A) (76-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Lactococcus lactis subsp. cremoris KW2	86.525	100	0.865
dprA	Streptococcus mutans UA159	59.712	98.582	0.589
dprA/cilB/dalA	Streptococcus mitis SK321	54.286	99.291	0.539
dprA/cilB/dalA	Streptococcus pneumoniae R6	53.571	99.291	0.532
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	53.571	99.291	0.532
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	53.571	99.291	0.532
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	53.571	99.291	0.532
dprA/cilB/dalA	Streptococcus pneumoniae D39	53.571	99.291	0.532
dprA	Bacillus subtilis subsp. subtilis str. 168	40	97.518	0.39
dprA	Legionella pneumophila strain ERS1305867	39.13	97.872	0.383
dprA	Haemophilus influenzae Rd KW20	38.889	95.745	0.372
dprA	Latilactobacillus sakei subsp. sakei 23K	38.745	96.099	0.372