Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   RAM31_RS04790 Genome accession   NZ_CP132368
Coordinates   1023003..1023677 (+) Length   224 a.a.
NCBI ID   WP_001166500.1    Uniprot ID   Q99VW2
Organism   Staphylococcus aureus strain UNC_SA44     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1018003..1028677
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RAM31_RS04765 (RAM31_04760) - 1018218..1019285 (+) 1068 WP_000980137.1 membrane protein -
  RAM31_RS04770 (RAM31_04765) - 1019436..1020479 (+) 1044 WP_001030771.1 alpha/beta hydrolase -
  RAM31_RS04775 (RAM31_04770) - 1020808..1021236 (+) 429 WP_000198504.1 hypothetical protein -
  RAM31_RS04780 (RAM31_04775) - 1021445..1021951 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  RAM31_RS04785 (RAM31_04780) graX 1022064..1022987 (+) 924 WP_000802955.1 auxiliary protein GraX/ApsX -
  RAM31_RS04790 (RAM31_04785) braR 1023003..1023677 (+) 675 WP_001166500.1 response regulator transcription factor GraR/ApsR Regulator
  RAM31_RS04795 (RAM31_04790) graS 1023670..1024710 (+) 1041 WP_001061262.1 histidine kinase GraS/ApsS -
  RAM31_RS04800 (RAM31_04795) vraF 1024854..1025615 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  RAM31_RS04805 (RAM31_04800) vraG 1025605..1027494 (+) 1890 WP_000143616.1 ABC transporter permease VraG -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26065.87 Da        Isoelectric Point: 4.3563

>NTDB_id=796428 RAM31_RS04790 WP_001166500.1 1023003..1023677(+) (braR) [Staphylococcus aureus strain UNC_SA44]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDDTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=796428 RAM31_RS04790 WP_001166500.1 1023003..1023677(+) (braR) [Staphylococcus aureus strain UNC_SA44]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCTTTCTATACCAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGACGATACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATTAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(149-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q99VW2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.455

98.214

0.397