Detailed information NTG0796088

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: PYV58_RS01460
• Genome accession: NZ_CP118892
• Coordinates: 316275..317333 (+)
• Length: 352 a.a.
• NCBI ID: WP_004816660.1
• Uniprot ID: A0A077L4V4
• Organism: Acinetobacter sp. TAC-1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 311275..322333

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PYV58_RS01445 (PYV58_01445)	mraY	311516..312634 (+)	1119	WP_004725416.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-
PYV58_RS01450 (PYV58_01450)	-	312707..313510 (+)	804	WP_004816656.1	putative RNA methyltransferase	-
PYV58_RS01455 (PYV58_01455)	ponA	313571..316111 (-)	2541	WP_034615058.1	penicillin-binding protein PBP1a	-
PYV58_RS01460 (PYV58_01460)	comM	316275..317333 (+)	1059	WP_004816660.1	pilus assembly protein PilM	Machinery gene
PYV58_RS01465 (PYV58_01465)	pilN	317333..317974 (+)	642	WP_034615056.1	PilN domain-containing protein	Machinery gene
PYV58_RS01470 (PYV58_01470)	comO	317971..318720 (+)	750	WP_004816666.1	type 4a pilus biogenesis protein PilO	Machinery gene
PYV58_RS01475 (PYV58_01475)	pilP	318717..319247 (+)	531	WP_034615053.1	pilus assembly protein PilP	Machinery gene
PYV58_RS01480 (PYV58_01480)	pilQ	319268..321442 (+)	2175	WP_034615050.1	type IV pilus secretin PilQ family protein	Machinery gene
PYV58_RS01485 (PYV58_01485)	aroK	321479..322021 (+)	543	WP_004725433.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39003.71 Da
• Isoelectric Point: 4.5366

>NTDB_id=796088 PYV58_RS01460 WP_004816660.1 316275..317333(+) (comM) [Acinetobacter sp. TAC-1]
MLRLYRKPNKGLIGVDISSTTVKILELSVKNGRYWVESYGLSPLLDGSVVEKNILNPEAVADALERAVNIGNPQSQNVAV
AVPTSMVIHKIIEMDADMSDEEREVQIRMDAEQYIPFPLDEVSLDFEVLKDKLANPNRVNVLLVATRAENIDSRVEVLEI
AGLSPKIADVESYAIERAFDVFSDTLPIGVNLVGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTQDVQNRYGLSYDE
AGRAKKDRTLPDDFETEVLMPFLEAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQIDLKKIENDAPSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=796088 PYV58_RS01460 WP_004816660.1 316275..317333(+) (comM) [Acinetobacter sp. TAC-1]
GTGCTTAGACTATATCGTAAGCCAAATAAGGGGTTAATAGGAGTAGATATTAGTTCTACTACTGTAAAGATTTTAGAGCT
CTCTGTTAAGAACGGTCGTTACTGGGTTGAAAGTTATGGATTAAGTCCACTGCTGGATGGGAGTGTTGTTGAGAAAAACA
TTCTTAATCCTGAAGCAGTTGCTGATGCGTTGGAAAGAGCAGTCAATATTGGCAATCCTCAATCGCAAAATGTCGCGGTT
GCTGTACCTACATCTATGGTGATTCACAAAATCATCGAAATGGATGCAGATATGTCAGATGAGGAAAGAGAAGTTCAGAT
TCGAATGGATGCTGAACAATATATCCCTTTCCCACTGGATGAAGTCAGTCTAGATTTTGAAGTGTTAAAAGATAAGCTGG
CAAATCCAAATCGAGTCAATGTGTTACTTGTTGCAACACGTGCAGAGAATATCGATTCTCGTGTTGAAGTTTTAGAAATC
GCGGGCTTATCACCTAAAATCGCAGATGTAGAAAGTTATGCAATTGAGCGTGCTTTTGATGTCTTTTCCGATACCTTGCC
AATTGGTGTAAATCTTGTGGGTATCCTAGATATTGGTCATACCATGACCACTTTGTCTGTGATGCAAAATGGCAAGATCA
TTTATACCCGAGAGCAAGTTTTTGGTGGCAAGCAGCTGACTCAAGATGTACAGAACCGTTATGGTTTGTCTTATGACGAA
GCTGGTCGTGCCAAAAAAGATCGGACTTTACCTGACGATTTTGAAACAGAAGTCTTGATGCCGTTTTTAGAAGCAGTTGT
ACAACAAGCTGCTCGCTCATTACAGTTCTTCTTTTCATCTTCTCAGTTTAACGAGATCGACCATATTTTATTGGCGGGTG
GTAATGCCAATATTCCTGGTTTGGCAAAATTATTACAACAAAAACTCGGTTATCGCGTCACGATTGCAAATCCTTTCTTG
CAAATGGGGTTTTCACCACAAATTGACTTAAAAAAAATAGAAAATGATGCACCTTCTTTAATGGTTGCATGTGGTTTAGC
TTTGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: A0A077L4V4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	84.375	100	0.844
pilM	Acinetobacter baumannii D1279779	84.091	100	0.841
comM	Acinetobacter baylyi ADP1	81.25	100	0.813
pilM	Legionella pneumophila strain ERS1305867	42.535	100	0.429