Detailed information NTG0794611

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: PXH68_RS00660
• Genome accession: NZ_CP118733
• Coordinates: 103118..103552 (+)
• Length: 144 a.a.
• NCBI ID: WP_044676306.1
• Uniprot ID: A0AA96VE61
• Organism: Streptococcus suivaginalis strain 29896
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 98118..108552

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PXH68_RS00625 (PXH68_00625)	-	98873..99232 (+)	360	WP_105117566.1	DUF1033 family protein	-
PXH68_RS00630 (PXH68_00630)	-	99242..100210 (-)	969	WP_248028796.1	S66 peptidase family protein	-
PXH68_RS00635 (PXH68_00635)	comYA	100296..101234 (+)	939	WP_172015367.1	competence type IV pilus ATPase ComGA	Machinery gene
PXH68_RS00640 (PXH68_00640)	comYB	101158..102195 (+)	1038	WP_248028795.1	competence type IV pilus assembly protein ComGB	Machinery gene
PXH68_RS00645 (PXH68_00645)	comYC	102197..102478 (+)	282	WP_172015368.1	competence type IV pilus major pilin ComGC	Machinery gene
PXH68_RS00650 (PXH68_00650)	comGD	102459..102866 (+)	408	WP_172015369.1	competence type IV pilus minor pilin ComGD	-
PXH68_RS00655 (PXH68_00655)	comYE	102838..103131 (+)	294	WP_024385126.1	competence type IV pilus minor pilin ComGE	Machinery gene
PXH68_RS00660 (PXH68_00660)	comGF/cglF	103118..103552 (+)	435	WP_044676306.1	competence type IV pilus minor pilin ComGF	Machinery gene
PXH68_RS00665 (PXH68_00665)	comGG	103530..104051 (+)	522	WP_172015370.1	competence type IV pilus minor pilin ComGG	-
PXH68_RS00670 (PXH68_00670)	comYH	104101..105054 (+)	954	WP_172015371.1	class I SAM-dependent methyltransferase	Machinery gene
PXH68_RS00675 (PXH68_00675)	-	105105..106292 (+)	1188	WP_172015372.1	acetate kinase	-
PXH68_RS00680 (PXH68_00680)	-	106662..107213 (+)	552	WP_172015373.1	folate family ECF transporter S component	-
PXH68_RS00685 (PXH68_00685)	-	107270..108526 (+)	1257	WP_248028794.1	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16370.71 Da
• Isoelectric Point: 8.0040

>NTDB_id=794611 PXH68_RS00660 WP_044676306.1 103118..103552(+) (comGF/cglF) [Streptococcus suivaginalis strain 29896]
MLKSKIPAFTLLECLVALVILSGSLLVFEGLSKLLVQEAHYQNQTIQKEWLVFSSQLRSEWDQAALVKVENGKVYVDKGG
QALAFGKSRSDDFRKSNDRGQGYQPMLYHLDSAAISQENQLVRIDFSFKNGEERTFIYAFKEKS

Nucleotide

• Length: 435 bp

>NTDB_id=794611 PXH68_RS00660 WP_044676306.1 103118..103552(+) (comGF/cglF) [Streptococcus suivaginalis strain 29896]
TTGTTAAAAAGTAAAATTCCTGCTTTTACTCTCTTGGAATGCTTGGTAGCCTTAGTCATTCTTTCAGGTAGTCTTCTGGT
TTTTGAAGGCTTGTCAAAACTGCTAGTCCAAGAAGCGCATTATCAAAATCAAACCATTCAAAAGGAATGGTTGGTCTTCT
CTAGTCAGTTGCGGTCGGAGTGGGACCAGGCTGCCTTGGTCAAGGTTGAAAATGGCAAGGTCTATGTTGATAAGGGAGGT
CAGGCTTTGGCCTTTGGTAAGTCACGGTCGGATGATTTTCGGAAATCAAATGACAGGGGACAGGGCTACCAGCCCATGCT
CTATCATCTAGACAGCGCAGCTATTTCCCAAGAAAACCAGCTGGTGCGCATCGACTTTAGCTTTAAAAACGGAGAGGAGA
GGACCTTTATCTATGCTTTTAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (37-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae TIGR4	53.901	97.917	0.528
comGF/cglF	Streptococcus pneumoniae Rx1	53.901	97.917	0.528
comGF/cglF	Streptococcus pneumoniae D39	53.901	97.917	0.528
comGF/cglF	Streptococcus pneumoniae R6	53.901	97.917	0.528
comGF/cglF	Streptococcus mitis NCTC 12261	54.478	93.056	0.507
comYF	Streptococcus mutans UA140	49.306	100	0.493
comYF	Streptococcus mutans UA159	48.611	100	0.486
comGF/cglF	Streptococcus mitis SK321	51.493	93.056	0.479
comGF	Lactococcus lactis subsp. cremoris KW2	48.227	97.917	0.472