Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | EsVE80_RS11175 | Genome accession | NZ_AP022822 |
| Coordinates | 2342342..2342827 (-) | Length | 161 a.a. |
| NCBI ID | WP_173103787.1 | Uniprot ID | A0A679IEB3 |
| Organism | Enterococcus saigonensis strain VE80 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2312130..2354750 | 2342342..2342827 | within | 0 |
Gene organization within MGE regions
Location: 2312130..2354750
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EsVE80_RS10960 (EsVE80_21490) | - | 2312130..2313602 (+) | 1473 | WP_173103750.1 | Y-family DNA polymerase | - |
| EsVE80_RS10965 (EsVE80_21500) | - | 2313685..2313879 (+) | 195 | WP_173103751.1 | hypothetical protein | - |
| EsVE80_RS10970 (EsVE80_21510) | - | 2313898..2314353 (-) | 456 | WP_232061190.1 | hypothetical protein | - |
| EsVE80_RS10975 (EsVE80_21520) | - | 2314362..2314847 (-) | 486 | WP_173103752.1 | hypothetical protein | - |
| EsVE80_RS10980 (EsVE80_21530) | - | 2314864..2315046 (-) | 183 | WP_173103753.1 | hypothetical protein | - |
| EsVE80_RS10985 (EsVE80_21540) | - | 2315064..2315444 (-) | 381 | WP_173103754.1 | hypothetical protein | - |
| EsVE80_RS10990 (EsVE80_21550) | - | 2315591..2316529 (-) | 939 | WP_173103755.1 | peptidoglycan amidohydrolase family protein | - |
| EsVE80_RS10995 (EsVE80_21560) | - | 2316532..2316837 (-) | 306 | WP_173103756.1 | hypothetical protein | - |
| EsVE80_RS11000 (EsVE80_21570) | - | 2316839..2317111 (-) | 273 | WP_173103757.1 | phage holin family protein | - |
| EsVE80_RS11005 (EsVE80_21580) | - | 2317124..2317366 (-) | 243 | WP_173103758.1 | hypothetical protein | - |
| EsVE80_RS11010 (EsVE80_21590) | - | 2317421..2317927 (-) | 507 | WP_232061192.1 | hypothetical protein | - |
| EsVE80_RS11015 (EsVE80_21600) | - | 2317863..2318051 (-) | 189 | WP_156137044.1 | hypothetical protein | - |
| EsVE80_RS11020 (EsVE80_21610) | - | 2318071..2320245 (-) | 2175 | WP_173103760.1 | BppU family phage baseplate upper protein | - |
| EsVE80_RS11025 (EsVE80_21620) | - | 2320245..2321255 (-) | 1011 | WP_232061337.1 | hypothetical protein | - |
| EsVE80_RS11030 (EsVE80_21630) | - | 2321265..2322284 (-) | 1020 | WP_173103762.1 | phage tail protein | - |
| EsVE80_RS11035 (EsVE80_21640) | - | 2322293..2323120 (-) | 828 | WP_173103763.1 | phage tail domain-containing protein | - |
| EsVE80_RS11040 (EsVE80_21650) | - | 2323123..2327652 (-) | 4530 | WP_232061194.1 | phage tail tape measure protein | - |
| EsVE80_RS14010 (EsVE80_21660) | - | 2327655..2327783 (-) | 129 | WP_269474238.1 | hypothetical protein | - |
| EsVE80_RS11045 (EsVE80_21670) | gpG | 2327822..2328202 (-) | 381 | WP_173103764.1 | phage tail assembly chaperone G | - |
| EsVE80_RS11050 (EsVE80_21680) | - | 2328258..2328863 (-) | 606 | WP_173103765.1 | phage tail protein | - |
| EsVE80_RS11055 (EsVE80_21690) | - | 2328877..2329272 (-) | 396 | WP_173103766.1 | hypothetical protein | - |
| EsVE80_RS11060 (EsVE80_21700) | - | 2329269..2329664 (-) | 396 | WP_173103767.1 | hypothetical protein | - |
| EsVE80_RS11065 (EsVE80_21710) | - | 2329661..2330053 (-) | 393 | WP_232061195.1 | phage head-tail adapter protein | - |
| EsVE80_RS11070 (EsVE80_21720) | - | 2330037..2330315 (-) | 279 | WP_173103768.1 | phage gp6-like head-tail connector protein | - |
| EsVE80_RS11075 (EsVE80_21730) | - | 2330452..2331597 (-) | 1146 | WP_173103769.1 | phage major capsid protein | - |
| EsVE80_RS11080 (EsVE80_21740) | - | 2331621..2332364 (-) | 744 | WP_173103770.1 | head maturation protease, ClpP-related | - |
| EsVE80_RS11085 (EsVE80_21750) | - | 2332354..2333505 (-) | 1152 | WP_173104197.1 | phage portal protein | - |
| EsVE80_RS11090 (EsVE80_21760) | - | 2333546..2333704 (-) | 159 | WP_173103771.1 | hypothetical protein | - |
| EsVE80_RS11095 (EsVE80_21770) | - | 2333715..2335355 (-) | 1641 | WP_408639880.1 | terminase TerL endonuclease subunit | - |
| EsVE80_RS11100 (EsVE80_21780) | - | 2335349..2335708 (-) | 360 | WP_173104198.1 | hypothetical protein | - |
| EsVE80_RS11105 (EsVE80_21790) | - | 2335845..2336153 (-) | 309 | WP_173103773.1 | HNH endonuclease | - |
| EsVE80_RS11110 (EsVE80_21800) | - | 2336354..2336767 (-) | 414 | WP_173103774.1 | hypothetical protein | - |
| EsVE80_RS11115 (EsVE80_21810) | - | 2336977..2337474 (+) | 498 | WP_173103775.1 | hypothetical protein | - |
| EsVE80_RS11120 (EsVE80_21820) | - | 2337503..2337820 (+) | 318 | WP_173103776.1 | hypothetical protein | - |
| EsVE80_RS11125 (EsVE80_21830) | - | 2337836..2338411 (+) | 576 | WP_173103777.1 | hypothetical protein | - |
| EsVE80_RS11130 (EsVE80_21840) | - | 2338452..2338625 (-) | 174 | WP_173103778.1 | hypothetical protein | - |
| EsVE80_RS11135 (EsVE80_21850) | - | 2338622..2339020 (-) | 399 | WP_173103779.1 | hypothetical protein | - |
| EsVE80_RS11140 (EsVE80_21860) | - | 2339017..2339244 (-) | 228 | WP_173103780.1 | hypothetical protein | - |
| EsVE80_RS11145 (EsVE80_21870) | - | 2339241..2339438 (-) | 198 | WP_173103781.1 | hypothetical protein | - |
| EsVE80_RS11150 (EsVE80_21880) | - | 2339435..2339938 (-) | 504 | WP_173103782.1 | hypothetical protein | - |
| EsVE80_RS11155 (EsVE80_21890) | - | 2339956..2340867 (-) | 912 | WP_173103783.1 | DNA cytosine methyltransferase | - |
| EsVE80_RS11160 (EsVE80_21900) | - | 2340902..2341105 (-) | 204 | WP_173103784.1 | hypothetical protein | - |
| EsVE80_RS11165 (EsVE80_21910) | dut | 2341309..2341725 (-) | 417 | WP_232061197.1 | dUTP diphosphatase | - |
| EsVE80_RS11170 (EsVE80_21920) | - | 2341842..2342330 (-) | 489 | WP_173103786.1 | hypothetical protein | - |
| EsVE80_RS11175 (EsVE80_21930) | ssb | 2342342..2342827 (-) | 486 | WP_173103787.1 | single-stranded DNA-binding protein | Machinery gene |
| EsVE80_RS11180 (EsVE80_21940) | - | 2342824..2343462 (-) | 639 | WP_173103788.1 | NUMOD4 domain-containing protein | - |
| EsVE80_RS11185 (EsVE80_21950) | - | 2343459..2344268 (-) | 810 | WP_173103789.1 | replisome organizer | - |
| EsVE80_RS11190 (EsVE80_21960) | - | 2344272..2344913 (-) | 642 | WP_173103790.1 | putative HNHc nuclease | - |
| EsVE80_RS11195 (EsVE80_21970) | - | 2344910..2345899 (-) | 990 | WP_173103791.1 | DUF1351 domain-containing protein | - |
| EsVE80_RS11200 (EsVE80_21980) | - | 2345896..2346630 (-) | 735 | WP_016173616.1 | ERF family protein | - |
| EsVE80_RS11205 (EsVE80_22000) | - | 2346789..2347496 (-) | 708 | WP_173103792.1 | Rha family transcriptional regulator | - |
| EsVE80_RS11210 (EsVE80_22010) | - | 2347531..2347686 (-) | 156 | WP_173103793.1 | hypothetical protein | - |
| EsVE80_RS11215 (EsVE80_22020) | - | 2347703..2347897 (-) | 195 | WP_016173614.1 | hypothetical protein | - |
| EsVE80_RS11220 (EsVE80_22030) | - | 2347894..2348175 (-) | 282 | WP_173103794.1 | hypothetical protein | - |
| EsVE80_RS11225 (EsVE80_22040) | - | 2348265..2348516 (+) | 252 | WP_173103795.1 | hypothetical protein | - |
| EsVE80_RS11230 (EsVE80_22050) | - | 2348497..2348652 (-) | 156 | WP_173103796.1 | hypothetical protein | - |
| EsVE80_RS11235 (EsVE80_22060) | - | 2348666..2348842 (-) | 177 | WP_173101895.1 | hypothetical protein | - |
| EsVE80_RS11240 (EsVE80_22070) | - | 2348839..2349366 (-) | 528 | WP_173103797.1 | ORF6C domain-containing protein | - |
| EsVE80_RS11245 (EsVE80_22080) | - | 2349359..2350315 (-) | 957 | WP_173103798.1 | hypothetical protein | - |
| EsVE80_RS11250 (EsVE80_22090) | - | 2350287..2350790 (-) | 504 | WP_173103799.1 | endonuclease domain-containing protein | - |
| EsVE80_RS11255 (EsVE80_22100) | - | 2350817..2351041 (-) | 225 | WP_086314903.1 | DUF739 family protein | - |
| EsVE80_RS11260 (EsVE80_22110) | - | 2351201..2351977 (+) | 777 | WP_173103800.1 | S24 family peptidase | - |
| EsVE80_RS11265 (EsVE80_22120) | - | 2352074..2352763 (+) | 690 | WP_173103801.1 | hypothetical protein | - |
| EsVE80_RS11270 (EsVE80_22130) | - | 2352773..2353138 (+) | 366 | WP_197745895.1 | tetratricopeptide repeat protein | - |
| EsVE80_RS11275 (EsVE80_22140) | - | 2353238..2354389 (+) | 1152 | WP_173103802.1 | site-specific integrase | - |
| EsVE80_RS11280 (EsVE80_22150) | - | 2354478..2354750 (-) | 273 | WP_173103803.1 | HU family DNA-binding protein | - |
Sequence
Protein
Download Length: 161 a.a. Molecular weight: 17917.66 Da Isoelectric Point: 4.6838
>NTDB_id=79259 EsVE80_RS11175 WP_173103787.1 2342342..2342827(-) (ssb) [Enterococcus saigonensis strain VE80]
MINQVVLIGRLTKDPGLKYTANGQAAASFTLAVNRNFTNQNGEREADFINCVIWRKPAETLANYARKGTLLGVTGRIQTR
NYENQQGQRVYVTEVVVENFQLLESKNSNSSQNTRDTGVSNNQTNNYAPDNQNATQTNLGVNPINDFEATTIDINDDDLP
F
MINQVVLIGRLTKDPGLKYTANGQAAASFTLAVNRNFTNQNGEREADFINCVIWRKPAETLANYARKGTLLGVTGRIQTR
NYENQQGQRVYVTEVVVENFQLLESKNSNSSQNTRDTGVSNNQTNNYAPDNQNATQTNLGVNPINDFEATTIDINDDDLP
F
Nucleotide
Download Length: 486 bp
>NTDB_id=79259 EsVE80_RS11175 WP_173103787.1 2342342..2342827(-) (ssb) [Enterococcus saigonensis strain VE80]
ATGATAAACCAAGTTGTACTTATTGGCAGACTTACTAAAGACCCCGGCCTCAAATATACCGCAAACGGTCAAGCAGCAGC
AAGTTTTACTTTAGCGGTAAATCGTAATTTCACGAACCAAAATGGTGAGCGTGAAGCAGATTTTATCAATTGCGTAATCT
GGCGTAAACCAGCTGAAACCTTAGCAAATTATGCCCGTAAAGGAACGCTGCTAGGTGTTACCGGCCGTATTCAAACGCGA
AATTATGAAAATCAACAAGGACAGCGAGTGTACGTGACAGAAGTAGTAGTTGAAAATTTTCAACTACTGGAGAGCAAGAA
TAGCAATTCTAGCCAAAATACACGCGATACAGGCGTTTCGAATAATCAAACGAATAATTACGCTCCTGACAATCAAAACG
CAACACAGACGAATTTAGGCGTGAACCCGATAAATGACTTTGAAGCTACGACAATCGATATTAATGATGACGATTTGCCG
TTTTGA
ATGATAAACCAAGTTGTACTTATTGGCAGACTTACTAAAGACCCCGGCCTCAAATATACCGCAAACGGTCAAGCAGCAGC
AAGTTTTACTTTAGCGGTAAATCGTAATTTCACGAACCAAAATGGTGAGCGTGAAGCAGATTTTATCAATTGCGTAATCT
GGCGTAAACCAGCTGAAACCTTAGCAAATTATGCCCGTAAAGGAACGCTGCTAGGTGTTACCGGCCGTATTCAAACGCGA
AATTATGAAAATCAACAAGGACAGCGAGTGTACGTGACAGAAGTAGTAGTTGAAAATTTTCAACTACTGGAGAGCAAGAA
TAGCAATTCTAGCCAAAATACACGCGATACAGGCGTTTCGAATAATCAAACGAATAATTACGCTCCTGACAATCAAAACG
CAACACAGACGAATTTAGGCGTGAACCCGATAAATGACTTTGAAGCTACGACAATCGATATTAATGATGACGATTTGCCG
TTTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
55.114 |
100 |
0.602 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
56.069 |
100 |
0.602 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
65.839 |
0.385 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
56.604 |
65.839 |
0.373 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
55.66 |
65.839 |
0.366 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
55.66 |
65.839 |
0.366 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
55.66 |
65.839 |
0.366 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
55.66 |
65.839 |
0.366 |
| ssbB/cilA | Streptococcus mitis SK321 |
55.66 |
65.839 |
0.366 |