Detailed information NTG0787458

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: PTC92_RS13900
• Genome accession: NZ_CP117759
• Coordinates: 2919150..2920268 (+)
• Length: 372 a.a.
• NCBI ID: WP_000347039.1
• Uniprot ID: A0A9P2XLL8
• Organism: Acinetobacter baumannii strain 2022CK-00843
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2914150..2925268

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PTC92_RS13890 (PTC92_13890)	-	2917266..2917958 (-)	693	WP_001108512.1	YggS family pyridoxal phosphate-dependent enzyme	-
PTC92_RS13895 (PTC92_13895)	pilT	2918085..2919122 (+)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
PTC92_RS13900 (PTC92_13900)	pilU	2919150..2920268 (+)	1119	WP_000347039.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
PTC92_RS13905 (PTC92_13905)	fur	2920338..2920775 (-)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
PTC92_RS13910 (PTC92_13910)	-	2920887..2921285 (+)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
PTC92_RS13915 (PTC92_13915)	-	2921340..2921663 (-)	324	WP_000442587.1	RnfH family protein	-
PTC92_RS13920 (PTC92_13920)	-	2921663..2922730 (-)	1068	WP_002019572.1	hypothetical protein	-
PTC92_RS13925 (PTC92_13925)	-	2922883..2923338 (-)	456	WP_000782976.1	bacteriohemerythrin	-
PTC92_RS13930 (PTC92_13930)	-	2923591..2924439 (-)	849	WP_000336548.1	class II glutamine amidotransferase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41933.13 Da
• Isoelectric Point: 6.6944

>NTDB_id=787458 PTC92_RS13900 WP_000347039.1 2919150..2920268(+) (pilU) [Acinetobacter baumannii strain 2022CK-00843]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRREFAETRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=787458 PTC92_RS13900 WP_000347039.1 2919150..2920268(+) (pilU) [Acinetobacter baumannii strain 2022CK-00843]
ATGGATTTTAATGACTTGCTCAACCTGATGGTTGAAAAAAAATCTTCCGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAACGGGCAAATTGTTCCAATTTCAAAAAACAGTCTTTCTGGGGAAGTGATTGGTCAACTGTTACATTCCA
TCATGAGTGAAAAACAACGCAGAGAATTTGCAGAAACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCGGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACCAAACGCGGCATTATTATTTTTGTAGGCGCGACAG
GCACAGGTAAATCTACTTCACTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCTAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTGACCGTCATAGTCAGCTTTACATGGACTTGTCACTTAACTTAAAGGCAATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAAGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCAGATGAAGGTCCTGATCAATTATCAGACGGGAAACAGCATTTAACTTTTGACCGCCAGTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (31-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.926	100	0.772
pilU	Pseudomonas stutzeri DSM 10701	69.565	98.925	0.688
pilU	Vibrio cholerae strain A1552	53.243	99.462	0.53
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.486	93.011	0.395