Detailed information NTG0787459

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG742_RS29300
• Genome accession: NZ_CP130727
• Coordinates: 6563307..6564593 (+)
• Length: 428 a.a.
• NCBI ID: WP_266827426.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00828
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6558307..6569593

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG742_RS29270 (OG742_29205)	-	6559051..6559245 (+)	195	WP_266462266.1	hypothetical protein	-
OG742_RS29285 (OG742_29220)	tig	6559915..6561303 (+)	1389	WP_405908561.1	trigger factor	-
OG742_RS29290 (OG742_29225)	clpP	6561742..6562347 (+)	606	WP_266464267.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG742_RS29295 (OG742_29230)	clpP	6562466..6563146 (+)	681	WP_371549185.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG742_RS29300 (OG742_29235)	clpX	6563307..6564593 (+)	1287	WP_266827426.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG742_RS29305 (OG742_29240)	-	6564661..6565638 (-)	978	WP_405908562.1	hypothetical protein	-
OG742_RS29310 (OG742_29245)	-	6565775..6568399 (+)	2625	WP_405908563.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46910.75 Da
• Isoelectric Point: 4.7838

>NTDB_id=787459 OG742_RS29300 WP_266827426.1 6563307..6564593(+) (clpX) [Streptomyces sp. NBC_00828]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENSTGQNREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKLIESRAGAKGIGFGATIRSKREIEAKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFESEALEAIADQAILRKTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
ADVVHSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=787459 OG742_RS29300 WP_266827426.1 6563307..6564593(+) (clpX) [Streptomyces sp. NBC_00828]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGTGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCTGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAGACGA
GCGAGGTGCGCTGGGAGGAACTTCCCAAGCCTCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTAGGCCAGGAGCCG
GCCAAGAAGGCGCTCTCGGTCGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGTGAGAACAGCACCGGTCAGAACCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATTCTGCTCCTCGGCCCGACGGGTTCCGGCAAGACCCTTCTCGCGCAGA
CCCTGGCCCGCATGCTGAACGTTCCGTTCGCCATCGCGGACGCGACGGCGCTGACGGAGGCCGGGTACGTCGGCGAGGAC
GTCGAGAACATTCTGCTGAAGCTCATCCAGGCAGCGGACTACGACGTCAAGAAGGCCGAGACCGGCATCATCTACATCGA
CGAGATCGACAAGGTCGCGCGGAAGAGCGAGAACCCCTCGATCACCCGCGACGTGTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTCGAAGGCACCACGGCCTCGGTCCCGCCGCAGGGCGGACGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCGCGGGCCTGGAGAAGCTCATCGAGTCGCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCGAAGCGGGAGATCGAGGCCAAGGACCAGTTCGAGGACGTCATGCCCG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGCCTCCCCGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCCCTCCTCCAGATCCTCGTCGAGCCCCGCAACGCACTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGAGCGAGGCCCTCGAAGCCATCGCCGACCAGGCCATCCTCCGCAAGACCGGCGCCCGCGGTCTGC
GCGCCATCATGGAGGAAGTCCTCATGTCCGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTCGTCATCACC
GCGGACGTCGTCCACTCGAACGTGAACCCGACGCTGATCCCGCGGGACGCGCGGGGCCGCGGCCCGGGCGAGCAGAAGAC
GGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.531	94.159	0.589
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.501	96.028	0.523