Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   PO908_RS10160 Genome accession   NZ_CP117042
Coordinates   1968417..1969607 (+) Length   396 a.a.
NCBI ID   WP_021002247.1    Uniprot ID   A0AAP6EPL7
Organism   Streptococcus anginosus strain CGMH_KH1     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1963417..1974607
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PO908_RS10135 (PO908_10100) comE 1965224..1965973 (-) 750 WP_022526721.1 competence system response regulator transcription factor ComE Regulator
  PO908_RS10140 (PO908_10105) comD/comD2 1965973..1967295 (-) 1323 WP_394467990.1 sensor histidine kinase Regulator
  PO908_RS10145 (PO908_10110) - 1967316..1967462 (-) 147 WP_003026814.1 bacteriocin -
  PO908_RS10155 (PO908_10120) rlmH 1967744..1968223 (-) 480 WP_041784074.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  PO908_RS10160 (PO908_10125) htrA 1968417..1969607 (+) 1191 WP_021002247.1 S1C family serine protease Regulator
  PO908_RS10165 (PO908_10130) spo0J 1969662..1970429 (+) 768 WP_021002248.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 396 a.a.        Molecular weight: 41680.65 Da        Isoelectric Point: 9.5698

>NTDB_id=782278 PO908_RS10160 WP_021002247.1 1968417..1969607(+) (htrA) [Streptococcus anginosus strain CGMH_KH1]
MKNSSNFTKKLLLLFMVLAIGFIGGLLGNLTSSKLSTNSSTTTKVNQVTTAYKNTNSTTQAVSKVKDAVVSVITYANNNS
QNSVFGNDDSNNNNDNSQQVASEGSGVIYKKDGKYAYLVTNTHVISGAKKVDIRLADGNKVPGEIVGSDTYSDISVVRIS
ADKVKSVAEFGDSSKLTVGETAIAIGSPLGSNYANTVTQGIISSLNRNVSLKSEDGQTISTQAIQTDTAINPGNSGGPLV
NIQGQVIGITSSKIASNGGTSVEGLGFAIPSNDVINIINQLETNGTVTRPALGIQMIDITNLSSSDLSRLKLPSKITSGV
VVRSAQSGMPAEGKLQKYDVITKVDDKEISSTSDLQSALYKHSIGDNIKITFYRNGKETTTTIKLTKSTKDLDSNN

Nucleotide


Download         Length: 1191 bp        

>NTDB_id=782278 PO908_RS10160 WP_021002247.1 1968417..1969607(+) (htrA) [Streptococcus anginosus strain CGMH_KH1]
ATGAAAAACTCTTCAAATTTCACAAAAAAATTGTTATTGCTTTTCATGGTCTTAGCCATAGGTTTTATCGGTGGTTTACT
TGGAAACTTAACTTCATCTAAATTATCAACAAATAGCTCTACAACGACTAAAGTTAATCAAGTTACTACTGCTTATAAAA
ATACAAATTCCACAACACAAGCTGTGAGTAAAGTAAAAGATGCTGTGGTATCCGTTATTACCTATGCTAATAATAATTCA
CAAAATAGTGTGTTTGGAAATGACGATTCAAATAATAACAATGATAATTCTCAACAAGTAGCTAGCGAAGGATCTGGGGT
TATTTATAAAAAAGATGGAAAATACGCTTACTTAGTAACCAATACTCACGTTATCAGTGGTGCTAAAAAAGTTGACATTC
GTTTAGCAGATGGTAATAAAGTTCCTGGAGAAATTGTAGGGTCAGATACTTATTCTGATATCTCCGTTGTTCGAATTAGT
GCTGATAAAGTAAAATCAGTTGCTGAATTTGGAGATTCTAGTAAATTGACGGTTGGTGAGACAGCTATTGCGATTGGAAG
TCCGCTCGGATCAAATTACGCTAACACTGTGACGCAAGGAATTATTTCTAGTTTAAATCGTAATGTTTCTTTAAAATCTG
AAGATGGACAAACGATTTCAACACAAGCTATTCAAACAGACACAGCTATCAACCCAGGGAACTCTGGAGGACCACTTGTG
AATATCCAAGGACAAGTAATTGGTATTACTTCAAGTAAAATAGCTAGCAACGGCGGAACTTCGGTTGAAGGATTAGGATT
TGCTATTCCATCTAATGATGTTATAAACATTATTAACCAATTAGAAACAAATGGAACTGTTACACGACCAGCTCTAGGAA
TCCAAATGATTGACATCACTAATCTGTCTAGTTCAGATCTATCACGCTTAAAACTTCCATCAAAAATAACTAGTGGAGTT
GTCGTACGTTCAGCTCAATCTGGAATGCCAGCTGAAGGAAAACTTCAAAAATATGATGTGATTACAAAAGTAGATGATAA
AGAAATTTCTTCAACAAGTGATTTACAATCCGCTTTATACAAACATTCAATTGGTGATAATATAAAAATCACTTTCTATC
GTAATGGAAAAGAGACCACTACCACTATAAAACTTACAAAATCTACAAAAGATTTAGATTCAAATAATTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus gordonii str. Challis substr. CH1

75.312

100

0.763

  htrA Streptococcus mitis NCTC 12261

72.796

100

0.73

  htrA Streptococcus pneumoniae Rx1

72.544

100

0.727

  htrA Streptococcus pneumoniae D39

72.544

100

0.727

  htrA Streptococcus pneumoniae R6

72.544

100

0.727

  htrA Streptococcus pneumoniae TIGR4

72.544

100

0.727

  htrA Streptococcus mutans UA159

55.471

99.242

0.551