Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   PO908_RS10165 Genome accession   NZ_CP117042
Coordinates   1969662..1970429 (+) Length   255 a.a.
NCBI ID   WP_021002248.1    Uniprot ID   A0AAP6EPV9
Organism   Streptococcus anginosus strain CGMH_KH1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1964662..1975429
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PO908_RS10135 (PO908_10100) comE 1965224..1965973 (-) 750 WP_022526721.1 competence system response regulator transcription factor ComE Regulator
  PO908_RS10140 (PO908_10105) comD/comD2 1965973..1967295 (-) 1323 WP_394467990.1 sensor histidine kinase Regulator
  PO908_RS10145 (PO908_10110) - 1967316..1967462 (-) 147 WP_003026814.1 bacteriocin -
  PO908_RS10155 (PO908_10120) rlmH 1967744..1968223 (-) 480 WP_041784074.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  PO908_RS10160 (PO908_10125) htrA 1968417..1969607 (+) 1191 WP_021002247.1 S1C family serine protease Regulator
  PO908_RS10165 (PO908_10130) spo0J 1969662..1970429 (+) 768 WP_021002248.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29696.21 Da        Isoelectric Point: 8.0359

>NTDB_id=782279 PO908_RS10165 WP_021002248.1 1969662..1970429(+) (spo0J) [Streptococcus anginosus strain CGMH_KH1]
MEKYQYIELKDIQTNPYQPRKEFSEEKITELANSIKEHGIIQPIIVRKSPIIGYELLAGERRFRAAKLAGLQNIPAIIKE
LTDDEMMKQAIIENLQREDLNPIEEAQSYQYLIDKGLTHKEIAQTMGKSRPYITNSVRLLNLPLNIIEAIKEGNISQGHA
RLLINLSEKEQNLWFDKILSQELSVRQLEKQLHSKQAKTVTKDKQQLFLKEEEKKLKKIFGTEISLQFSEQSQSGKICIH
FSNLEEYQRIIDSFK

Nucleotide


Download         Length: 768 bp        

>NTDB_id=782279 PO908_RS10165 WP_021002248.1 1969662..1970429(+) (spo0J) [Streptococcus anginosus strain CGMH_KH1]
ATGGAAAAATATCAATATATTGAACTTAAGGACATTCAAACTAATCCTTATCAACCAAGAAAAGAATTTTCAGAAGAAAA
AATTACTGAACTTGCTAATTCTATAAAAGAACATGGGATTATTCAGCCTATCATCGTACGAAAATCTCCAATAATTGGTT
ATGAATTACTAGCTGGTGAAAGACGTTTTAGAGCTGCTAAATTAGCAGGCTTACAAAATATACCAGCTATTATAAAAGAA
TTAACAGATGATGAAATGATGAAGCAAGCTATCATCGAAAATTTACAACGAGAAGATTTAAATCCTATAGAAGAAGCACA
ATCTTACCAATATTTAATTGACAAAGGATTGACGCATAAAGAAATCGCTCAAACTATGGGAAAATCACGTCCTTATATTA
CAAATTCTGTCCGATTATTAAATTTACCTCTCAATATTATTGAAGCGATAAAAGAAGGAAATATTTCTCAAGGACATGCT
CGTCTGCTCATCAATCTCTCAGAGAAAGAGCAAAATCTGTGGTTTGATAAAATCCTATCTCAAGAACTTTCAGTTCGGCA
GTTAGAAAAACAATTGCATTCCAAACAAGCAAAAACAGTAACAAAAGATAAACAGCAACTCTTCCTCAAAGAGGAAGAGA
AAAAATTAAAAAAGATATTTGGTACAGAGATTTCTCTTCAATTTTCTGAACAATCTCAATCAGGGAAAATTTGTATTCAT
TTTTCAAACCTAGAAGAATATCAAAGAATTATTGACAGCTTTAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(146-191)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

54.118

100

0.541