Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   POF60_RS02125 Genome accession   NZ_CP116705
Coordinates   368471..369214 (+) Length   247 a.a.
NCBI ID   WP_038406058.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain CNCTC 10/84 dCas9     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 363471..374214
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  POF60_RS02090 (POF60_02090) tsaE 364273..364716 (+) 444 WP_016502535.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  POF60_RS02095 (POF60_02095) - 364709..365230 (+) 522 WP_000043150.1 GNAT family N-acetyltransferase -
  POF60_RS02100 (POF60_02100) - 365239..366546 (+) 1308 WP_000708159.1 LCP family protein -
  POF60_RS02105 (POF60_02105) - 366610..366906 (-) 297 WP_000690176.1 hypothetical protein -
  POF60_RS02110 (POF60_02110) - 366903..367322 (-) 420 WP_038406057.1 HIT family protein -
  POF60_RS02115 (POF60_02115) - 367658..368161 (+) 504 WP_000773457.1 hypothetical protein -
  POF60_RS02120 (POF60_02120) - 368213..368399 (-) 187 Protein_342 hypothetical protein -
  POF60_RS02125 (POF60_02125) pptA 368471..369214 (+) 744 WP_038406058.1 ABC transporter ATP-binding protein Regulator
  POF60_RS02130 (POF60_02130) pptB 369198..370232 (+) 1035 WP_000732708.1 ABC transporter permease Regulator
  POF60_RS02135 (POF60_02135) - 370290..371090 (+) 801 WP_000155919.1 phosphotransferase family protein -
  POF60_RS02140 (POF60_02140) trmB 371080..371715 (+) 636 WP_001266024.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  POF60_RS02150 (POF60_02150) - 372168..372539 (+) 372 Protein_347 hypothetical protein -
  POF60_RS02155 (POF60_02155) - 373018..373460 (+) 443 Protein_348 hypothetical protein -
  POF60_RS02160 (POF60_02160) - 373567..373731 (+) 165 WP_000166480.1 hypothetical protein -

Sequence

Protein


Download         Length: 247 a.a.        Molecular weight: 27624.20 Da        Isoelectric Point: 4.6594

>NTDB_id=779150 POF60_RS02125 WP_038406058.1 368471..369214(+) (pptA) [Streptococcus agalactiae strain CNCTC 10/84 dCas9]
MLKIENVTGGYVNIPVLKNISFEVNDGELVGLIGLNGAGKSTTINEIIGILRPYQGDITIDGISLEADQELYRKKIGFIP
ETPSLYEELTLREHLETVAMAYDIATDEVMARAQKLLEMFRLTDKLDWFPMHFSKGMKQKVMIICAFVVSPSLFIVDEPF
LGLDPLAISDLINLLAEEKAKGKSILMSTHVLDSAEKMCDRFVILHKGEIRAVGTLEELRAIFGDSNANLNDIYIALTKE
VRYEKVI

Nucleotide


Download         Length: 744 bp        

>NTDB_id=779150 POF60_RS02125 WP_038406058.1 368471..369214(+) (pptA) [Streptococcus agalactiae strain CNCTC 10/84 dCas9]
ATGTTAAAAATTGAAAATGTTACAGGGGGGTATGTTAATATCCCAGTTTTAAAAAATATTTCTTTTGAAGTAAATGATGG
AGAGTTAGTTGGATTAATTGGGCTTAATGGTGCAGGAAAATCAACCACTATTAACGAGATTATTGGTATTTTGAGACCCT
ATCAAGGAGATATTACAATTGATGGTATTAGTCTTGAAGCCGACCAAGAACTTTATAGAAAGAAAATAGGCTTTATTCCT
GAAACACCAAGTCTCTATGAGGAACTAACTCTCAGGGAACATTTAGAAACGGTAGCTATGGCGTATGATATTGCCACCGA
TGAAGTTATGGCACGTGCGCAAAAACTATTAGAGATGTTTCGTCTAACAGATAAATTAGACTGGTTTCCAATGCATTTTT
CAAAGGGAATGAAACAAAAGGTTATGATTATTTGTGCTTTTGTTGTATCTCCAAGTTTATTTATTGTTGATGAACCATTT
TTAGGTTTGGATCCACTAGCTATTTCAGATTTGATTAATCTTCTAGCAGAAGAAAAAGCTAAAGGGAAATCTATTTTGAT
GTCAACACACGTATTAGATTCTGCCGAAAAAATGTGTGATCGTTTTGTTATTTTACATAAAGGAGAAATACGGGCAGTTG
GAACCCTAGAGGAATTACGGGCTATTTTTGGAGACAGTAATGCTAATTTAAATGACATCTACATAGCTCTGACAAAAGAG
GTGCGATATGAAAAAGTTATTTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

77.824

96.761

0.753
  pptA Streptococcus salivarius strain HSISS4

77.406

96.761

0.749