Detailed information NTG0771756

Bioinformatically predicted

Overview

• Name: cinA
• Type: Machinery gene
• Locus tag: AVT_RS23680
• Genome accession: NZ_CP115303
• Coordinates: 4569758..4570996 (+)
• Length: 412 a.a.
• NCBI ID: WP_270184854.1
• Uniprot ID: -
• Organism: Bacillus tropicus strain JMT105-2
• Function: unknown (predicted from homology) Unclear

Genomic Context

Location: 4564758..4575996

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AVT_RS23650 (AVT_23650)	yfmH	4564810..4566096 (+)	1287	WP_270184853.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
AVT_RS23655 (AVT_23655)	ymfI	4566200..4566913 (+)	714	WP_087966375.1	elongation factor P 5-aminopentanone reductase	-
AVT_RS23660 (AVT_23660)	-	4566989..4567237 (+)	249	WP_029439572.1	DUF3243 domain-containing protein	-
AVT_RS23665 (AVT_23665)	-	4567377..4568162 (+)	786	WP_000574107.1	DUF3388 domain-containing protein	-
AVT_RS23670 (AVT_23670)	-	4568184..4569095 (+)	912	WP_270185580.1	helix-turn-helix domain-containing protein	-
AVT_RS23675 (AVT_23675)	pgsA	4569159..4569737 (+)	579	WP_001052965.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
AVT_RS23680 (AVT_23680)	cinA	4569758..4570996 (+)	1239	WP_270184854.1	competence/damage-inducible protein CinA	Machinery gene
AVT_RS23685 (AVT_23685)	recA	4571141..4571749 (+)	609	Protein_4593	recombinase RecA	-
AVT_RS23690 (AVT_23690)	-	4572077..4572499 (+)	423	Protein_4594	DNA recombination/repair protein RecA	-
AVT_RS23695 (AVT_23695)	rny	4572981..4574543 (+)	1563	WP_000204911.1	ribonuclease Y	-
AVT_RS23700 (AVT_23700)	-	4574706..4575500 (+)	795	WP_001221095.1	TIGR00282 family metallophosphoesterase	-
AVT_RS23705 (AVT_23705)	spoVS	4575649..4575909 (+)	261	WP_000404341.1	stage V sporulation protein SpoVS	-

Sequence

Protein

• Length: 412 a.a.
• Molecular weight: 45486.81 Da
• Isoelectric Point: 5.4733

>NTDB_id=771756 AVT_RS23680 WP_270184854.1 4569758..4570996(+) (cinA) [Bacillus tropicus strain JMT105-2]
MNAEIIAVGTELLLGQIANTNAQFLSEKLASIGINVYYHTVVGDNNKRLQQAIEVAEERADMLIFTGGLGPTKDDLTKET
IASSLGEELVYDENALALISDYFKRTGREFTENNKKQALVLNGATVFANDHGMAPGMGLNKNGKVYILLPGPPKEIKPMY
VSYVEPFLRNFTTGENIYSRVLRFFGIGESQLEVKVQDLIDRQTNPTIAPLANDGEVTLRLTAKHQNAHEAEKLIQHMED
LILERVGEFFYGYDQEFLHYKAIELLKKKGLTLACAESLTGGLFGNQVTESAGVSSVFKGGVICYHNDVKQHVLHVPEEV
LSTDGAVSKECARYLAENVRGLLKVDIGISFTGVAGPDASEHKEPGTVFVGLAIKDEPTVVFPLNLSGSRQQIRERSAKY
GFYHLYKKLEEI

Nucleotide

• Length: 1239 bp

>NTDB_id=771756 AVT_RS23680 WP_270184854.1 4569758..4570996(+) (cinA) [Bacillus tropicus strain JMT105-2]
ATGAATGCTGAAATTATTGCGGTTGGAACGGAATTATTGCTTGGACAAATTGCAAATACAAACGCCCAGTTTTTATCTGA
AAAGTTAGCTTCAATTGGTATTAATGTGTACTACCATACTGTAGTTGGAGATAATAACAAACGATTACAGCAGGCGATTG
AAGTTGCAGAAGAACGTGCGGACATGCTTATTTTTACAGGTGGATTAGGCCCGACAAAAGATGATTTGACGAAGGAAACA
ATTGCGTCTAGCTTAGGGGAAGAGCTTGTATATGACGAAAATGCATTAGCATTAATAAGCGATTATTTTAAACGTACAGG
TCGTGAGTTCACTGAAAATAATAAGAAGCAGGCACTCGTTTTGAATGGAGCAACTGTATTTGCAAATGATCACGGTATGG
CACCTGGTATGGGGTTAAATAAGAACGGAAAAGTTTATATCTTATTACCAGGACCACCGAAAGAAATAAAGCCAATGTAT
GTAAGTTATGTAGAGCCTTTTTTACGTAACTTTACAACAGGAGAAAACATTTATTCTCGCGTGCTTCGCTTCTTCGGAAT
TGGGGAATCTCAATTAGAGGTGAAAGTTCAAGATTTAATTGATAGACAAACGAACCCAACAATTGCCCCGCTTGCGAATG
ATGGAGAAGTGACATTACGTTTAACTGCAAAACATCAAAATGCTCATGAAGCAGAGAAACTCATTCAGCATATGGAAGAT
TTGATTTTAGAAAGAGTAGGAGAATTTTTCTACGGGTATGACCAAGAGTTTCTGCACTATAAGGCGATAGAGTTATTGAA
GAAAAAAGGATTAACTTTAGCATGTGCAGAAAGCTTAACAGGTGGTCTCTTCGGTAATCAAGTAACAGAAAGTGCTGGTG
TGTCTTCCGTATTTAAAGGCGGTGTCATTTGTTATCATAATGATGTGAAGCAACATGTTTTACATGTACCTGAGGAAGTG
TTGTCTACTGACGGTGCAGTTAGTAAAGAATGTGCTCGCTATCTTGCTGAAAATGTTAGAGGATTATTAAAAGTAGATAT
CGGAATTAGTTTCACTGGGGTAGCAGGACCAGATGCTTCAGAACATAAAGAGCCGGGAACAGTATTTGTTGGATTGGCGA
TTAAAGATGAACCAACTGTAGTCTTTCCTCTAAACTTAAGCGGAAGTCGTCAACAAATTAGGGAACGCTCAGCAAAATAT
GGGTTTTATCATTTGTATAAAAAGCTAGAAGAGATATAA

Domains

Predicted by InterproScan.

• Probable molybdopterin binding domain (MoCF_biosynth) (5-169)

• Competence-damaged protein (CinA) (258-408)

• Damage-inducible protein CinA KH domain (CinA_KH) (179-252)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cinA	Bacillus subtilis subsp. subtilis str. 168	58.981	100	0.59
cinA	Streptococcus mitis SK321	47.733	100	0.485
cinA	Streptococcus pneumoniae TIGR4	47.494	100	0.483
cinA	Streptococcus pneumoniae Rx1	47.017	100	0.478
cinA	Streptococcus pneumoniae R6	47.017	100	0.478
cinA	Streptococcus pneumoniae D39	46.778	100	0.476
cinA	Streptococcus mitis NCTC 12261	46.778	100	0.476
cinA	Streptococcus mutans UA159	45.567	98.544	0.449
cinA	Streptococcus suis isolate S10	41.534	91.748	0.381