Detailed information NTG0764128

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: OZ911_RS27040
• Genome accession: NZ_CP114035
• Coordinates: 5933300..5934562 (-)
• Length: 420 a.a.
• NCBI ID: WP_016489623.1
• Uniprot ID: -
• Organism: Pseudomonas fortuita strain GMI12077
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5928300..5939562

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OZ911_RS27020 (OZ911_27030)	-	5929609..5929833 (-)	225	WP_132844974.1	hypothetical protein	-
OZ911_RS27025 (OZ911_27035)	-	5929963..5931567 (-)	1605	WP_060516914.1	SPOR domain-containing protein	-
OZ911_RS27030 (OZ911_27040)	aroB	5931583..5932680 (-)	1098	WP_070086873.1	3-dehydroquinate synthase	-
OZ911_RS27035 (OZ911_27045)	aroK	5932777..5933295 (-)	519	WP_024717571.1	shikimate kinase AroK	-
OZ911_RS27040 (OZ911_27050)	pilQ	5933300..5934562 (-)	1263	WP_016489623.1	type IV pilus secretin PilQ	Machinery gene
OZ911_RS27045 (OZ911_27055)	-	5934486..5935502 (-)	1017	WP_070086874.1	pilus assembly protein PilP	-
OZ911_RS27050 (OZ911_27060)	-	5935499..5936035 (-)	537	WP_016489625.1	PilN domain-containing protein	-
OZ911_RS27055 (OZ911_27065)	pilM	5936032..5936913 (-)	882	WP_023048611.1	type IV pilus biogenesis protein PilM	-
OZ911_RS27060 (OZ911_27070)	-	5937108..5939558 (+)	2451	WP_371918298.1	penicillin-binding protein 1A	-

Sequence

Protein

• Length: 420 a.a.
• Molecular weight: 45918.61 Da
• Isoelectric Point: 4.9055

>NTDB_id=764128 OZ911_RS27040 WP_016489623.1 5933300..5934562(-) (pilQ) [Pseudomonas fortuita strain GMI12077]
MKNVMKWVLAALLPIPLVWATPYQGEPLSLNFQDVEVRSVLQVLADYAGINLVASDDVQGNVTLRLQDVPWDQALDLVLR
SKGLAQRHEGNVLLVAPAAAFAPQPFDAHPVPDAQMQPLRRELIPIHHAKAAELVELLLTSLADDSTFTVRGSLGVDERT
NTLVAHQPADRLAELRQLVTQLDVPVRQVAIEARIVEANVDYEKSLGVRWGGPLYGESLRPGKELFVDLGVERAGSSVGL
GLLRGDVLLDLELSAMEKSGNGEIISQPKVVTADKETARILKGTEVPYQETSQSGATSVAFREASLSLEVTPQITPDNKV
IMAVRVTKDEPDYVNAVNNVPPIRKNEVNAKVRVADGETIVIGGVYSTSQNNVVDKVPFFGDLPYVGRLFRRDVLQEKKS
ELLVFLTPRIMSDQAIAVSR

Nucleotide

• Length: 1263 bp

>NTDB_id=764128 OZ911_RS27040 WP_016489623.1 5933300..5934562(-) (pilQ) [Pseudomonas fortuita strain GMI12077]
ATGAAGAACGTGATGAAATGGGTGTTGGCGGCCCTGCTGCCGATCCCGCTGGTGTGGGCGACGCCGTATCAGGGTGAGCC
ACTTTCTTTGAATTTCCAGGATGTAGAGGTTCGCTCGGTGCTGCAGGTGCTGGCCGATTACGCGGGCATCAATCTGGTTG
CCAGCGATGACGTGCAGGGCAACGTGACCTTGCGTTTGCAGGACGTGCCCTGGGATCAGGCGCTTGACCTGGTGCTGCGC
AGCAAGGGCCTGGCACAGCGGCACGAAGGCAATGTGTTGCTGGTGGCCCCTGCGGCAGCGTTTGCCCCGCAGCCGTTCGA
TGCCCATCCGGTGCCGGATGCGCAGATGCAGCCGTTACGCCGTGAACTGATACCGATCCATCATGCCAAGGCGGCGGAGC
TGGTTGAGTTGTTGCTGACCAGCCTGGCGGATGACAGCACCTTCACCGTTCGTGGCAGCCTGGGTGTCGATGAGCGCACC
AATACCCTGGTGGCGCATCAGCCGGCCGATCGCCTGGCCGAATTGCGGCAACTGGTTACGCAGCTGGACGTGCCGGTGCG
CCAGGTGGCGATCGAGGCGCGTATCGTCGAGGCCAACGTCGACTACGAGAAAAGCCTGGGGGTGCGCTGGGGCGGGCCGC
TGTACGGGGAAAGCCTGCGCCCGGGCAAGGAACTGTTCGTCGACCTCGGCGTGGAGCGGGCGGGCAGCAGCGTCGGCCTG
GGCCTGCTGCGTGGCGACGTGTTGCTCGACCTGGAACTCAGCGCCATGGAAAAAAGCGGCAACGGCGAGATCATCTCGCA
GCCCAAGGTGGTCACGGCCGACAAGGAAACGGCCAGGATCCTCAAGGGCACCGAGGTGCCCTACCAGGAAACCAGCCAGA
GTGGCGCCACCTCGGTCGCCTTCCGCGAAGCCTCGCTTTCGCTGGAGGTGACCCCGCAGATTACACCTGACAACAAGGTA
ATCATGGCTGTCAGGGTGACCAAGGACGAGCCTGATTACGTCAATGCCGTGAACAACGTACCGCCGATCCGCAAGAACGA
GGTCAATGCCAAGGTTCGTGTGGCTGACGGCGAAACGATCGTGATCGGTGGCGTGTACTCGACTTCGCAAAACAATGTGG
TCGACAAGGTGCCATTTTTTGGCGATCTGCCGTATGTTGGGCGGCTGTTTCGACGCGATGTATTACAAGAGAAAAAATCC
GAGCTGCTGGTCTTCCTGACTCCGCGTATCATGAGTGACCAGGCGATTGCTGTGAGTCGTTGA

Domains

Predicted by InterproScan.

• Bacterial type II and III secretion system protein (Secretin) (255-411)

• Bacterial type II/III secretion system short domain (Secretin_N) (123-188)

• Secretin and TonB N terminus short domain (STN) (51-97)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Pseudomonas aeruginosa PAK	58.998	100	0.617
pilQ	Acinetobacter baumannii strain A118	42.241	100	0.467
pilQ	Acinetobacter baumannii D1279779	42.241	100	0.467
comQ	Acinetobacter baylyi ADP1	43.111	100	0.462
pilQ	Legionella pneumophila strain Lp02	42.143	100	0.421
pilQ	Legionella pneumophila strain ERS1305867	42.143	100	0.421
pilQ	Vibrio campbellii strain DS40M4	40.941	100	0.414
pilQ	Vibrio cholerae O1 biovar El Tor strain E7946	41.487	99.286	0.412
pilQ	Vibrio cholerae strain A1552	41.487	99.286	0.412