Detailed information NTG0763880

Bioinformatically predicted

Overview

• Name: cinA
• Type: Machinery gene
• Locus tag: OYT09_RS10300
• Genome accession: NZ_CP113973
• Coordinates: 2248419..2249687 (+)
• Length: 422 a.a.
• NCBI ID: WP_272640504.1
• Uniprot ID: -
• Organism: Paenibacillus polymyxa strain P3
• Function: facilitate localization of RecA (predicted from homology) Homologous recombination

Genomic Context

Location: 2243419..2254687

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OYT09_RS10265 (OYT09_10270)	ymfI	2243419..2244186 (+)	768	WP_272640501.1	elongation factor P 5-aminopentanone reductase	-
OYT09_RS10270 (OYT09_10275)	-	2244289..2244543 (+)	255	WP_013309950.1	DUF3243 domain-containing protein	-
OYT09_RS10275 (OYT09_10280)	-	2244771..2245544 (+)	774	WP_013370747.1	DUF3388 domain-containing protein	-
OYT09_RS10280 (OYT09_10285)	-	2245575..2246639 (+)	1065	WP_272640502.1	RodZ domain-containing protein	-
OYT09_RS10285 (OYT09_10290)	-	2246724..2246888 (+)	165	WP_023988236.1	hypothetical protein	-
OYT09_RS10290 (OYT09_10295)	-	2247034..2247525 (+)	492	WP_025722076.1	YajQ family cyclic di-GMP-binding protein	-
OYT09_RS10295 (OYT09_10300)	pgsA	2247736..2248323 (+)	588	WP_272640503.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
OYT09_RS10300 (OYT09_10305)	cinA	2248419..2249687 (+)	1269	WP_272640504.1	competence/damage-inducible protein A	Machinery gene
OYT09_RS10305 (OYT09_10310)	recA	2249930..2250991 (+)	1062	WP_272640505.1	recombinase RecA	Machinery gene
OYT09_RS10310 (OYT09_10315)	-	2251188..2251937 (+)	750	WP_272640506.1	regulatory protein RecX	-
OYT09_RS10315 (OYT09_10320)	rny	2252312..2253856 (+)	1545	WP_013309958.1	ribonuclease Y	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46370.37 Da
• Isoelectric Point: 4.7700

>NTDB_id=763880 OYT09_RS10300 WP_272640504.1 2248419..2249687(+) (cinA) [Paenibacillus polymyxa strain P3]
MKAEIIAVGTELLLGQIVNTNAQYLSQELATIGIDVYFQTVVGDNIDRLQEAIRIAQKRADIILFSGGLGPTQDDLTKDA
IASVLGRKLHIDRLAMDKLDQFFRNRGVEMTENNRRQALSIEGATPLENETGLAVGDAIAQDGKFYVVLPGPPKELKPMF
ANQAKPWLLQQALSGEEMPIYSKMLKFAGIGESALETHLLDLIQSQTDPTIAPYAKEGEVTIRISTKAASESEALIKLTA
TEVEIQQRLSEYMYASEDVTLEKIIVDLMAKRGLTVSAAESCTGGMLMEHITSIPGSAVMFQGGIVCYSNEMKMKLLNVP
YDYLEGDQAPGAVSKEVALVLAEQARMIMDSDFGLSVTGVAGPGYSERKPVGLVYIGIAERDKETEVHELRLSGNRETIR
LRSVKAILYKLWRRLVENEKLS

Nucleotide

• Length: 1269 bp

>NTDB_id=763880 OYT09_RS10300 WP_272640504.1 2248419..2249687(+) (cinA) [Paenibacillus polymyxa strain P3]
ATGAAAGCTGAAATAATTGCAGTAGGTACAGAGTTATTGCTCGGTCAAATAGTAAATACAAATGCTCAATATTTGTCACA
AGAGTTGGCTACAATCGGAATCGATGTATATTTTCAGACTGTAGTTGGCGATAACATAGATCGGCTTCAGGAAGCAATAA
GAATTGCTCAGAAGCGTGCGGATATTATTTTGTTTTCCGGCGGTCTGGGACCGACTCAGGATGATTTGACGAAAGATGCG
ATAGCGTCTGTATTGGGGCGAAAATTGCACATAGATCGTCTTGCAATGGATAAGCTAGATCAGTTTTTCCGTAACCGTGG
GGTAGAAATGACCGAGAATAACCGCCGGCAGGCGCTTTCTATTGAAGGCGCTACTCCGCTTGAAAATGAGACAGGGCTAG
CTGTGGGCGACGCAATTGCACAGGACGGTAAATTTTATGTAGTTTTGCCTGGACCGCCTAAGGAACTCAAACCCATGTTT
GCAAACCAAGCGAAACCTTGGTTGCTTCAGCAGGCATTGAGCGGTGAGGAAATGCCAATTTATTCAAAAATGCTAAAATT
TGCAGGGATCGGTGAGTCAGCTCTTGAAACCCATTTGTTAGATCTGATCCAATCCCAGACAGACCCCACGATTGCTCCTT
ATGCCAAGGAAGGGGAAGTCACGATCCGTATATCCACCAAGGCGGCCAGCGAAAGTGAAGCATTAATTAAGCTGACGGCT
ACCGAAGTAGAAATTCAGCAGCGTCTTTCGGAATATATGTATGCAAGCGAAGATGTTACGCTGGAGAAGATTATCGTGGA
TCTAATGGCCAAACGCGGACTCACTGTGAGTGCGGCAGAAAGCTGTACAGGTGGAATGCTGATGGAACACATCACTTCTA
TACCTGGCAGTGCTGTTATGTTTCAAGGTGGCATCGTGTGCTATTCCAATGAAATGAAGATGAAATTACTCAACGTGCCT
TATGATTATTTGGAAGGGGATCAAGCGCCAGGTGCAGTGAGTAAGGAAGTAGCCCTTGTGCTTGCAGAGCAGGCGAGAAT
GATCATGGACAGTGATTTTGGACTTTCAGTTACTGGTGTTGCCGGGCCTGGGTATTCCGAACGGAAGCCAGTCGGTCTGG
TGTATATTGGTATTGCTGAACGCGACAAGGAAACGGAAGTACATGAACTGAGACTGAGTGGTAACCGTGAAACAATCCGA
CTGCGATCAGTCAAAGCAATCCTGTACAAATTGTGGCGCAGACTGGTAGAGAACGAGAAACTCTCTTAA

Domains

Predicted by InterproScan.

• Damage-inducible protein CinA KH domain (CinA_KH) (182-255)

• Probable molybdopterin binding domain (MoCF_biosynth) (5-168)

• Competence-damaged protein (CinA) (260-414)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cinA	Streptococcus mitis SK321	50.488	97.156	0.491
cinA	Streptococcus mitis NCTC 12261	50	97.156	0.486
cinA	Streptococcus pneumoniae TIGR4	50	97.156	0.486
cinA	Streptococcus pneumoniae Rx1	49.756	97.156	0.483
cinA	Streptococcus pneumoniae R6	49.756	97.156	0.483
cinA	Streptococcus pneumoniae D39	49.512	97.156	0.481
cinA	Bacillus subtilis subsp. subtilis str. 168	48.762	95.735	0.467
cinA	Streptococcus mutans UA159	45.647	100	0.46
cinA	Streptococcus suis isolate S10	45.078	91.469	0.412