Detailed information NTG0761413

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: OS912_RS05350
• Genome accession: NZ_CP113266
• Coordinates: 1044622..1045083 (-)
• Length: 153 a.a.
• NCBI ID: WP_268233038.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain BC1
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1039622..1050083

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OS912_RS05315 (OS912_05320)	-	1039936..1040760 (-)	825	WP_000727904.1	membrane protein insertase YidC	-
OS912_RS05320 (OS912_05325)	rnpA	1040735..1041106 (-)	372	WP_000739246.1	ribonuclease P protein component	-
OS912_RS05325 (OS912_05330)	-	1041123..1041254 (-)	132	WP_000768904.1	hypothetical protein	-
OS912_RS05330 (OS912_05335)	-	1041255..1042445 (-)	1191	WP_000167766.1	acetate kinase	-
OS912_RS05335 (OS912_05340)	comYH	1042496..1043449 (-)	954	WP_050212403.1	class I SAM-dependent methyltransferase	Machinery gene
OS912_RS05340 (OS912_05345)	-	1043510..1044097 (-)	588	Protein_1034	class I SAM-dependent methyltransferase	-
OS912_RS05345 (OS912_05350)	comGG/cglG	1044234..1044644 (-)	411	WP_000265621.1	competence type IV pilus minor pilin ComGG	Machinery gene
OS912_RS05350 (OS912_05355)	comGF/cglF	1044622..1045083 (-)	462	WP_268233038.1	competence type IV pilus minor pilin ComGF	Machinery gene
OS912_RS05355 (OS912_05360)	comGE/cglE	1045046..1045348 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
OS912_RS05360 (OS912_05365)	comGD/cglD	1045311..1045715 (-)	405	WP_000588013.1	competence type IV pilus minor pilin ComGD	Machinery gene
OS912_RS05365 (OS912_05370)	comGC/cglC	1045708..1046034 (-)	327	WP_000738626.1	comG operon protein ComGC	Machinery gene
OS912_RS05370 (OS912_05375)	comGB/cglB	1046036..1047052 (-)	1017	WP_268233044.1	competence type IV pilus assembly protein ComGB	Machinery gene
OS912_RS05375 (OS912_05380)	comGA/cglA/cilD	1047000..1047941 (-)	942	WP_000249550.1	competence type IV pilus ATPase ComGA	Machinery gene
OS912_RS05380 (OS912_05385)	-	1048017..1048382 (-)	366	WP_000286415.1	DUF1033 family protein	-
OS912_RS05385 (OS912_05390)	-	1048533..1049591 (-)	1059	WP_000649466.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17834.40 Da
• Isoelectric Point: 8.0016

>NTDB_id=761413 OS912_RS05350 WP_268233038.1 1044622..1045083(-) (comGF/cglF) [Streptococcus pneumoniae strain BC1]
MVQNSCWQSKSHKVKAFTLLESLLALIVISGGLLLFQTMSQLLISEVRYQQQSEQKEWLLFVDQLEAELDRSQFEKVEGN
RLYMKQDGKDIAIGKSKADDFRKTDASGRGYQPMVYGLKSAQITEDNQLVHFRFQFQKGLEREFIYRVEKEKS

Nucleotide

• Length: 462 bp

>NTDB_id=761413 OS912_RS05350 WP_268233038.1 1044622..1045083(-) (comGF/cglF) [Streptococcus pneumoniae strain BC1]
ATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAAGGTCAAGGCTTTTACCTTGTTAGAATCCCTACTTGCCCTCAT
TGTCATCAGTGGGGGATTACTCCTTTTTCAAACTATGAGTCAGCTCCTCATTTCAGAAGTTCGCTACCAGCAACAAAGCG
AGCAAAAGGAGTGGCTCTTGTTTGTGGACCAACTTGAGGCAGAATTAGACCGTTCGCAGTTCGAAAAAGTAGAAGGCAAT
CGCCTATACATGAAGCAAGATGGCAAGGACATCGCCATCGGTAAGTCTAAGGCAGATGATTTCCGTAAAACCGATGCTAG
TGGACGGGGGTATCAGCCTATGGTTTATGGCCTCAAATCAGCTCAGATTACAGAGGACAATCAACTGGTTCATTTTCGTT
TCCAGTTTCAAAAAGGCTTAGAAAGGGAGTTCATCTATCGTGTGGAAAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (45-141)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae Rx1	94.118	100	0.941
comGF/cglF	Streptococcus pneumoniae D39	94.118	100	0.941
comGF/cglF	Streptococcus pneumoniae R6	94.118	100	0.941
comGF/cglF	Streptococcus pneumoniae TIGR4	94.118	100	0.941
comGF/cglF	Streptococcus mitis SK321	92.81	100	0.928
comGF/cglF	Streptococcus mitis NCTC 12261	91.503	100	0.915