Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   FOF60_RS09115 Genome accession   NZ_CP109811
Coordinates   1845003..1846250 (+) Length   415 a.a.
NCBI ID   WP_192473253.1    Uniprot ID   -
Organism   Mesobacillus jeotgali strain SBJS01     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 1840003..1851250
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOF60_RS09090 (FOF60_09090) ymfI 1841153..1841875 (+) 723 WP_192473248.1 elongation factor P 5-aminopentanone reductase -
  FOF60_RS09095 (FOF60_09095) - 1841978..1842235 (+) 258 WP_192473249.1 DUF3243 domain-containing protein -
  FOF60_RS09100 (FOF60_09100) - 1842510..1843301 (+) 792 WP_192473250.1 DUF3388 domain-containing protein -
  FOF60_RS09105 (FOF60_09105) - 1843322..1844215 (+) 894 WP_192473251.1 helix-turn-helix domain-containing protein -
  FOF60_RS09110 (FOF60_09110) pgsA 1844399..1844977 (+) 579 WP_192473252.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  FOF60_RS09115 (FOF60_09115) cinA 1845003..1846250 (+) 1248 WP_192473253.1 competence/damage-inducible protein A Machinery gene
  FOF60_RS09120 (FOF60_09120) recA 1846545..1847584 (+) 1040 Protein_1760 recombinase RecA -
  FOF60_RS09125 (FOF60_09125) rny 1847955..1849517 (+) 1563 WP_251613466.1 ribonuclease Y -
  FOF60_RS09130 (FOF60_09130) - 1849636..1850433 (+) 798 WP_192473256.1 TIGR00282 family metallophosphoesterase -

Sequence

Protein


Download         Length: 415 a.a.        Molecular weight: 44756.19 Da        Isoelectric Point: 5.2050

>NTDB_id=749492 FOF60_RS09115 WP_192473253.1 1845003..1846250(+) (cinA) [Mesobacillus jeotgali strain SBJS01]
MNAEIIAVGSELLLGQIVNTNARFLSRQLADLGINVYFHTVVGDNPDRLKNAMKIARERAELIIFTGGLGPTKDDLTKDT
IAGQLGKRLVLDEEAMKSIELYFEKTNRIMTENNRKQALVIEGSTVLKNDHGMAPGMFLATEDNKYMLLPGPPSEMEPMF
LKYGQAAIAGLSGNQAKIESRVLRFFGIGEAALESEIEDLIDQQSNPTIAPLAGDGEVTLRLTARDDVHGTAQALIDSME
AKIMDRVGEHFYGYDETSLVIELSKLLKSQNLTLSAAESLTGGMFQQDLTSVPGASSLFKGGIVCYSNEAKMGLVNVNPK
TIEEFGAVSRECAEELAINAAAITNSDIGISFTGAAGPDSLEGHPAGTVFIGVHIKGKPVHVEKLSLSGSRDAIRKRSVK
FGCQIIINRLSGTRK

Nucleotide


Download         Length: 1248 bp        

>NTDB_id=749492 FOF60_RS09115 WP_192473253.1 1845003..1846250(+) (cinA) [Mesobacillus jeotgali strain SBJS01]
ATGAATGCCGAAATCATTGCTGTGGGATCTGAATTGCTCCTTGGGCAAATTGTCAACACGAACGCCAGGTTCCTTTCCAG
GCAGCTTGCCGACCTGGGAATCAATGTTTACTTTCATACTGTTGTCGGAGATAATCCTGATAGATTGAAGAATGCAATGA
AAATAGCCCGGGAACGTGCAGAGCTGATTATCTTTACGGGCGGATTGGGTCCGACGAAAGATGACCTGACAAAAGATACT
ATTGCCGGGCAGCTTGGAAAGCGGCTTGTTCTTGATGAAGAAGCGATGAAGTCCATCGAATTGTATTTTGAAAAAACGAA
CAGGATAATGACTGAGAATAACAGGAAGCAGGCGCTCGTGATCGAAGGGTCCACGGTTTTGAAAAATGATCATGGCATGG
CTCCGGGGATGTTCCTGGCAACTGAGGACAATAAATACATGCTCCTGCCGGGTCCCCCTTCTGAAATGGAGCCTATGTTC
TTGAAATACGGTCAGGCAGCTATTGCAGGCTTGTCTGGCAATCAAGCTAAAATTGAGTCGAGAGTTCTTCGATTCTTTGG
AATTGGCGAGGCGGCTCTTGAATCGGAAATAGAAGATTTGATTGACCAGCAAAGCAATCCGACCATTGCACCACTGGCTG
GGGATGGTGAAGTTACACTGAGGCTTACAGCGAGGGACGACGTCCACGGAACTGCTCAGGCATTGATTGACTCAATGGAA
GCAAAAATCATGGACAGAGTCGGTGAGCATTTTTATGGTTACGACGAAACTTCGTTAGTGATCGAGCTTTCGAAACTATT
GAAAAGCCAAAACCTGACGTTATCAGCTGCTGAAAGCTTGACCGGCGGCATGTTCCAGCAGGATTTGACTTCAGTTCCAG
GTGCAAGCAGCCTTTTTAAAGGCGGTATAGTCTGTTACTCCAATGAGGCCAAAATGGGTCTTGTGAACGTTAATCCAAAA
ACAATCGAGGAATTTGGAGCTGTAAGCAGGGAATGTGCGGAAGAACTTGCAATAAATGCTGCTGCGATTACCAACTCTGA
TATCGGCATCAGCTTCACCGGAGCAGCTGGCCCAGACAGCCTGGAGGGGCATCCAGCCGGAACGGTTTTCATCGGAGTAC
ATATAAAGGGGAAGCCAGTCCATGTGGAAAAACTAAGCCTCAGCGGCTCCCGGGATGCCATCAGAAAAAGATCAGTAAAG
TTTGGCTGCCAGATCATAATTAATAGATTGTCAGGAACACGGAAGTGA

Domains

Predicted by InterproScan.

Damage-inducible protein CinA KH domain (CinA_KH)

(180-253)

Competence-damaged protein (CinA)

(259-408)

Probable molybdopterin binding domain (MoCF_biosynth)

(5-164)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

59.314

98.313

0.583
  cinA Streptococcus mitis NCTC 12261

46.635

100

0.467
  cinA Streptococcus pneumoniae TIGR4

46.635

100

0.467
  cinA Streptococcus pneumoniae Rx1

46.154

100

0.463
  cinA Streptococcus pneumoniae R6

46.154

100

0.463
  cinA Streptococcus pneumoniae D39

45.913

100

0.46
  cinA Streptococcus mitis SK321

49.476

92.048

0.455
  cinA Streptococcus mutans UA159

45.906

97.108

0.446
  cinA Streptococcus suis isolate S10

39.683

91.084

0.361