Detailed information
Bioinformatically predicted
Overview
| Name | pilA/pilAI | Type | Machinery gene |
| Locus tag | AZSP09_RS20655 | Genome accession | NZ_AP021844 |
| Coordinates | 3365398..3365793 (+) | Length | 131 a.a. |
| NCBI ID | WP_014236553.1 | Uniprot ID | A0A5H2YB23 |
| Organism | Azospira sp. I09 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 3360398..3370793
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AZSP09_RS15830 (AZSP09_31250) | - | 3361260..3363626 (+) | 2367 | WP_172974780.1 | GspE/PulE family protein | - |
| AZSP09_RS15835 (AZSP09_31260) | - | 3363637..3365226 (+) | 1590 | WP_152090581.1 | HD family phosphohydrolase | - |
| AZSP09_RS20655 (AZSP09_31270) | pilA/pilAI | 3365398..3365793 (+) | 396 | WP_014236553.1 | pilin | Machinery gene |
| AZSP09_RS15845 (AZSP09_31280) | sixA | 3365895..3366359 (-) | 465 | WP_043797885.1 | phosphohistidine phosphatase SixA | - |
| AZSP09_RS15850 (AZSP09_31290) | - | 3366388..3367911 (-) | 1524 | WP_152090582.1 | CYTH and CHAD domain-containing protein | - |
| AZSP09_RS15855 (AZSP09_31300) | - | 3368052..3368696 (-) | 645 | WP_083834017.1 | Crp/Fnr family transcriptional regulator | - |
| AZSP09_RS15860 (AZSP09_31310) | - | 3368962..3370131 (+) | 1170 | WP_152090583.1 | efflux RND transporter periplasmic adaptor subunit | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 13362.44 Da Isoelectric Point: 7.6311
>NTDB_id=74945 AZSP09_RS20655 WP_014236553.1 3365398..3365793(+) (pilA/pilAI) [Azospira sp. I09]
MNKVQQGFTLIELMVVVAIIGILAAVALPAYSDYQAKGKIAAGLAEISAVRTAYEMIANDGGTPTEATIGLDTSKSGHCT
YTVDNTGISCALKNAPTKVNGLAIKLARAAGGAWSCDASALPTDMKPKGCS
MNKVQQGFTLIELMVVVAIIGILAAVALPAYSDYQAKGKIAAGLAEISAVRTAYEMIANDGGTPTEATIGLDTSKSGHCT
YTVDNTGISCALKNAPTKVNGLAIKLARAAGGAWSCDASALPTDMKPKGCS
Nucleotide
Download Length: 396 bp
>NTDB_id=74945 AZSP09_RS20655 WP_014236553.1 3365398..3365793(+) (pilA/pilAI) [Azospira sp. I09]
ATGAACAAGGTTCAGCAAGGTTTCACCCTGATTGAACTGATGGTGGTGGTTGCTATCATCGGTATCCTGGCCGCAGTTGC
TCTGCCGGCTTACTCCGACTACCAGGCCAAGGGTAAGATCGCCGCCGGTCTGGCAGAAATTTCTGCCGTCCGTACCGCCT
ATGAAATGATCGCCAACGATGGCGGCACCCCGACCGAAGCTACCATCGGGCTTGACACTTCCAAGAGCGGCCACTGTACC
TACACCGTGGACAACACCGGCATCTCCTGCGCCCTGAAGAATGCCCCGACCAAGGTCAATGGTCTGGCTATCAAGCTGGC
CCGGGCTGCCGGTGGTGCCTGGTCCTGCGACGCCAGCGCCCTGCCCACTGATATGAAGCCGAAGGGTTGCAGCTAA
ATGAACAAGGTTCAGCAAGGTTTCACCCTGATTGAACTGATGGTGGTGGTTGCTATCATCGGTATCCTGGCCGCAGTTGC
TCTGCCGGCTTACTCCGACTACCAGGCCAAGGGTAAGATCGCCGCCGGTCTGGCAGAAATTTCTGCCGTCCGTACCGCCT
ATGAAATGATCGCCAACGATGGCGGCACCCCGACCGAAGCTACCATCGGGCTTGACACTTCCAAGAGCGGCCACTGTACC
TACACCGTGGACAACACCGGCATCTCCTGCGCCCTGAAGAATGCCCCGACCAAGGTCAATGGTCTGGCTATCAAGCTGGC
CCGGGCTGCCGGTGGTGCCTGGTCCTGCGACGCCAGCGCCCTGCCCACTGATATGAAGCCGAAGGGTTGCAGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
45.652 |
100 |
0.481 |
| pilA | Acinetobacter baumannii strain A118 |
44.853 |
100 |
0.466 |
| pilA | Vibrio cholerae strain A1552 |
39.189 |
100 |
0.443 |
| pilA | Vibrio cholerae C6706 |
39.189 |
100 |
0.443 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
39.189 |
100 |
0.443 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
42.537 |
100 |
0.435 |
| pilA | Pseudomonas aeruginosa PAK |
37.584 |
100 |
0.427 |
| pilA | Vibrio parahaemolyticus RIMD 2210633 |
37.681 |
100 |
0.397 |