Detailed information NTG0073763

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: ACRAD_RS13145
• Genome accession: NZ_AP019740
• Coordinates: 2776935..2777993 (-)
• Length: 352 a.a.
• NCBI ID: WP_005024205.1
• Uniprot ID: A0A2T1J1Z2
• Organism: Acinetobacter radioresistens DSM 6976 = NBRC 102413 = CIP 103788 strain NBRC 102413
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2771935..2782993

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACRAD_RS13120 (ACRAD_25640)	aroK	2772259..2772810 (-)	552	WP_005024215.1	shikimate kinase AroK	-
ACRAD_RS13125 (ACRAD_25650)	pilQ	2772847..2775027 (-)	2181	WP_005024212.1	type IV pilus secretin PilQ	Machinery gene
ACRAD_RS13130 (ACRAD_25660)	pilP	2775045..2775572 (-)	528	WP_005024210.1	pilus assembly protein PilP	Machinery gene
ACRAD_RS13135 (ACRAD_25670)	comO	2775569..2776279 (-)	711	WP_005024207.1	type 4a pilus biogenesis protein PilO	Machinery gene
ACRAD_RS13140 (ACRAD_25680)	pilN	2776276..2776935 (-)	660	WP_005018044.1	PilN domain-containing protein	Machinery gene
ACRAD_RS13145 (ACRAD_25690)	comM	2776935..2777993 (-)	1059	WP_005024205.1	pilus assembly protein PilM	Machinery gene
ACRAD_RS13150 (ACRAD_25700)	ponA	2778155..2780701 (+)	2547	WP_005024203.1	penicillin-binding protein PBP1a	-
ACRAD_RS13155 (ACRAD_25710)	-	2780748..2781554 (-)	807	WP_005024201.1	putative RNA methyltransferase	-
ACRAD_RS13160 (ACRAD_25720)	mraY	2781621..2782739 (-)	1119	WP_005018035.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 38898.47 Da
• Isoelectric Point: 4.4198

>NTDB_id=73763 ACRAD_RS13145 WP_005024205.1 2776935..2777993(-) (comM) [Acinetobacter radioresistens DSM 6976 = NBRC 102413 = CIP 103788 strain NBRC 102413]
MLRLYRKPNKGLVGIDVSSTSVKLLELSVKGGRYWVESYGLYPLSDGSVVEKNILNPEAVADALERVIDIANPQAANAAF
AVPTSAVINKVIEMDADMNDDEREVQIRMDAEQYIPFPLDEVSLDFEVLPDILANPDRVNVLLVATRTENVDARVEVLEM
AGLTAKIADVESYALERAFKVFADTLPIGVNTVGILDIGHTMTTLSVMQHGKIIYTREQVFGGKQLTQDIQNRYGLSYEE
AGRAKKERNLPDDYDIEILEPFLEALVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFAPQVDVQKVEKDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=73763 ACRAD_RS13145 WP_005024205.1 2776935..2777993(-) (comM) [Acinetobacter radioresistens DSM 6976 = NBRC 102413 = CIP 103788 strain NBRC 102413]
GTGCTCAGGTTATATCGTAAACCAAATAAAGGATTAGTCGGAATAGATGTAAGTTCTACTTCGGTTAAATTATTAGAGCT
CTCTGTAAAAGGTGGCAGATACTGGGTTGAAAGTTACGGGCTTTATCCGCTTTCCGATGGAAGTGTCGTTGAAAAAAATA
TTCTGAATCCTGAAGCGGTTGCCGATGCTTTAGAGCGCGTAATTGACATTGCTAACCCTCAGGCGGCTAATGCGGCTTTT
GCAGTACCTACTTCGGCGGTGATCAATAAAGTCATCGAAATGGATGCAGACATGAACGATGATGAACGTGAAGTTCAGAT
CCGTATGGATGCAGAGCAATATATTCCTTTTCCTTTAGACGAAGTCAGTCTTGATTTCGAAGTGTTGCCAGATATATTGG
CAAATCCTGATCGAGTAAATGTACTGCTGGTGGCCACCCGTACTGAAAATGTAGATGCACGTGTCGAAGTGCTGGAAATG
GCAGGTCTAACCGCGAAAATTGCTGATGTAGAAAGTTATGCGCTAGAACGTGCGTTTAAAGTGTTCGCTGATACATTGCC
TATAGGGGTGAATACCGTAGGTATTCTAGATATCGGCCACACCATGACAACTTTGTCTGTCATGCAGCATGGCAAGATTA
TCTATACTCGCGAGCAGGTTTTTGGTGGAAAGCAGCTGACTCAGGACATCCAGAATCGTTATGGCCTTTCCTATGAAGAA
GCTGGCCGGGCCAAAAAAGAGCGTAATTTGCCAGATGATTATGATATTGAAATACTCGAGCCTTTCTTAGAGGCCTTAGT
GCAACAGGCTGCTCGTTCTTTGCAGTTTTTTTTCTCGTCTTCACAGTTTAATGAGATTGATCATATTTTATTGGCGGGTG
GAAATGCCAATATACCGGGACTGGCCAAACTACTCCAACAAAAGCTGGGCTACCGGGTAACAATTGCCAATCCATTTTTA
CAGATGGGTTTTGCGCCGCAGGTTGATGTACAAAAAGTTGAAAAAGATGCATCTTCACTCATGGTGGCTTGTGGTTTAGC
GCTGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: A0A2T1J1Z2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	84.375	100	0.844
pilM	Acinetobacter baumannii D1279779	84.375	100	0.844
comM	Acinetobacter baylyi ADP1	81.25	100	0.813
pilM	Legionella pneumophila strain ERS1305867	41.808	100	0.42