Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | ACRAD_RS13130 | Genome accession | NZ_AP019740 |
| Coordinates | 2775045..2775572 (-) | Length | 175 a.a. |
| NCBI ID | WP_005024210.1 | Uniprot ID | - |
| Organism | Acinetobacter radioresistens DSM 6976 = NBRC 102413 = CIP 103788 strain NBRC 102413 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2770045..2780572
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACRAD_RS13110 (ACRAD_25620) | - | 2770284..2771147 (-) | 864 | WP_005024218.1 | hypothetical protein | - |
| ACRAD_RS13115 (ACRAD_25630) | aroB | 2771155..2772240 (-) | 1086 | WP_005024217.1 | 3-dehydroquinate synthase | - |
| ACRAD_RS13120 (ACRAD_25640) | aroK | 2772259..2772810 (-) | 552 | WP_005024215.1 | shikimate kinase AroK | - |
| ACRAD_RS13125 (ACRAD_25650) | pilQ | 2772847..2775027 (-) | 2181 | WP_005024212.1 | type IV pilus secretin PilQ | Machinery gene |
| ACRAD_RS13130 (ACRAD_25660) | pilP | 2775045..2775572 (-) | 528 | WP_005024210.1 | pilus assembly protein PilP | Machinery gene |
| ACRAD_RS13135 (ACRAD_25670) | comO | 2775569..2776279 (-) | 711 | WP_005024207.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| ACRAD_RS13140 (ACRAD_25680) | pilN | 2776276..2776935 (-) | 660 | WP_005018044.1 | PilN domain-containing protein | Machinery gene |
| ACRAD_RS13145 (ACRAD_25690) | comM | 2776935..2777993 (-) | 1059 | WP_005024205.1 | pilus assembly protein PilM | Machinery gene |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19465.64 Da Isoelectric Point: 7.7737
>NTDB_id=73760 ACRAD_RS13130 WP_005024210.1 2775045..2775572(-) (pilP) [Acinetobacter radioresistens DSM 6976 = NBRC 102413 = CIP 103788 strain NBRC 102413]
MTWNKIILGLCCGMILVGCDSRIDAVNEEMTVIRNQPPLPIEPAPVFSPVPTFAYAAHQFRSPFLPSSLAAELKVMAGKR
VYPNFSRQPQPLESYALESLNMKGSMRNSRGQIIALIQTPDGQIEQVQRGNYMGMHHGRIVQITPTQIDLVEIIPDGREG
YVERPRSLVLIGPQP
MTWNKIILGLCCGMILVGCDSRIDAVNEEMTVIRNQPPLPIEPAPVFSPVPTFAYAAHQFRSPFLPSSLAAELKVMAGKR
VYPNFSRQPQPLESYALESLNMKGSMRNSRGQIIALIQTPDGQIEQVQRGNYMGMHHGRIVQITPTQIDLVEIIPDGREG
YVERPRSLVLIGPQP
Nucleotide
Download Length: 528 bp
>NTDB_id=73760 ACRAD_RS13130 WP_005024210.1 2775045..2775572(-) (pilP) [Acinetobacter radioresistens DSM 6976 = NBRC 102413 = CIP 103788 strain NBRC 102413]
ATGACTTGGAATAAGATCATTTTAGGCCTGTGCTGCGGCATGATTCTGGTAGGCTGTGATTCACGTATAGATGCAGTAAA
TGAAGAGATGACAGTCATTCGTAACCAACCACCTCTACCGATTGAACCGGCACCTGTGTTCAGTCCTGTACCTACATTTG
CTTATGCAGCACATCAGTTCAGAAGTCCATTTTTACCTAGCTCGCTTGCAGCTGAGTTAAAAGTTATGGCCGGGAAGCGG
GTTTATCCGAATTTTTCACGCCAACCCCAACCTCTTGAGAGCTATGCCCTTGAATCTTTAAATATGAAAGGCAGTATGCG
TAATTCAAGAGGGCAGATTATTGCACTAATCCAGACGCCCGATGGCCAGATTGAACAAGTGCAGCGCGGGAACTATATGG
GTATGCATCATGGGCGTATTGTTCAGATTACACCTACCCAGATTGATCTGGTTGAGATCATCCCGGATGGGCGCGAAGGC
TATGTGGAACGTCCCCGCAGTCTAGTACTGATTGGGCCACAGCCTTAA
ATGACTTGGAATAAGATCATTTTAGGCCTGTGCTGCGGCATGATTCTGGTAGGCTGTGATTCACGTATAGATGCAGTAAA
TGAAGAGATGACAGTCATTCGTAACCAACCACCTCTACCGATTGAACCGGCACCTGTGTTCAGTCCTGTACCTACATTTG
CTTATGCAGCACATCAGTTCAGAAGTCCATTTTTACCTAGCTCGCTTGCAGCTGAGTTAAAAGTTATGGCCGGGAAGCGG
GTTTATCCGAATTTTTCACGCCAACCCCAACCTCTTGAGAGCTATGCCCTTGAATCTTTAAATATGAAAGGCAGTATGCG
TAATTCAAGAGGGCAGATTATTGCACTAATCCAGACGCCCGATGGCCAGATTGAACAAGTGCAGCGCGGGAACTATATGG
GTATGCATCATGGGCGTATTGTTCAGATTACACCTACCCAGATTGATCTGGTTGAGATCATCCCGGATGGGCGCGAAGGC
TATGTGGAACGTCCCCGCAGTCTAGTACTGATTGGGCCACAGCCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
78.286 |
100 |
0.783 |
| comL | Acinetobacter baylyi ADP1 |
72.254 |
98.857 |
0.714 |