Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   OAT02_RS10835 Genome accession   NZ_CP106947
Coordinates   2033619..2034857 (+) Length   412 a.a.
NCBI ID   WP_053512446.1    Uniprot ID   A0A9X6KHF7
Organism   Bacillus thuringiensis strain 4F5     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 2028619..2039857
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OAT02_RS10805 (OAT02_10805) - 2028674..2029960 (+) 1287 WP_000411982.1 pitrilysin family protein -
  OAT02_RS10810 (OAT02_10810) - 2030061..2030774 (+) 714 WP_000759607.1 SDR family oxidoreductase -
  OAT02_RS10815 (OAT02_10815) - 2030850..2031098 (+) 249 WP_000114450.1 DUF3243 domain-containing protein -
  OAT02_RS10820 (OAT02_10820) - 2031237..2032022 (+) 786 WP_000574107.1 DUF3388 domain-containing protein -
  OAT02_RS10825 (OAT02_10825) - 2032044..2032955 (+) 912 WP_000137491.1 RodZ domain-containing protein -
  OAT02_RS10830 (OAT02_10830) pgsA 2033020..2033598 (+) 579 WP_001052967.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  OAT02_RS10835 (OAT02_10835) cinA 2033619..2034857 (+) 1239 WP_053512446.1 competence/damage-inducible protein CinA Machinery gene
  OAT02_RS10840 (OAT02_10840) recA 2035002..2036033 (+) 1032 WP_001283860.1 recombinase RecA Machinery gene
  OAT02_RS10845 (OAT02_10845) rny 2036515..2038080 (+) 1566 WP_000099769.1 ribonuclease Y -
  OAT02_RS10850 (OAT02_10850) - 2038243..2039037 (+) 795 WP_001221095.1 TIGR00282 family metallophosphoesterase -
  OAT02_RS10855 (OAT02_10855) spoVS 2039187..2039447 (+) 261 WP_000404341.1 stage V sporulation protein SpoVS -

Sequence

Protein


Download         Length: 412 a.a.        Molecular weight: 45507.85 Da        Isoelectric Point: 5.3499

>NTDB_id=736761 OAT02_RS10835 WP_053512446.1 2033619..2034857(+) (cinA) [Bacillus thuringiensis strain 4F5]
MNAEIIAVGTELLLGQIANTNAQFLSEKLASIGINVYYHTVVGDNNKRLQKAIEAAEERADILIFTGGLGPTKDDLTKET
IAASLDEELVYDEKALALISNYFKRTGREFTENNKKQALVLNGATVFANDHGMAPGMGVNKNGKVYILLPGPPKEMKPMY
VSYVEPFLRNFTTGENIYSRVLRFFGIGESQLEVKVQDLIDGQTNPTIAPLANDGEVTLRLTAKHQNVSEAEKLIQHVED
LILERVGEFFYGYDQEFLHYKAIELLKRKGLTLACAESLTGGLFGNQVTENAGVSSVFKGGVICYHNDVKQHVLRVPEEV
LHTDGAVSKECARYLAENVKDVLKADIGISFTGVAGPDASEQKEPGTVFVGLSIKDEPTVVFPLNLSGSRQQIRERTVKY
GFYHLYKKLEEI

Nucleotide


Download         Length: 1239 bp        

>NTDB_id=736761 OAT02_RS10835 WP_053512446.1 2033619..2034857(+) (cinA) [Bacillus thuringiensis strain 4F5]
ATGAATGCTGAGATTATTGCGGTTGGAACTGAATTATTACTTGGACAAATTGCAAATACAAATGCCCAGTTTTTATCTGA
AAAGTTAGCTTCAATCGGAATTAACGTGTACTATCATACTGTTGTTGGTGATAATAATAAGCGATTGCAAAAGGCGATTG
AAGCTGCGGAAGAACGTGCTGATATACTTATTTTTACAGGTGGATTAGGACCAACAAAAGATGATTTAACGAAAGAAACG
ATAGCTGCTAGTTTAGATGAAGAGCTTGTGTATGATGAAAAGGCATTAGCCTTAATAAGTAATTACTTTAAGCGTACAGG
CCGTGAATTTACGGAGAATAATAAAAAGCAAGCGCTCGTTTTAAATGGAGCAACAGTATTTGCAAATGACCACGGTATGG
CGCCTGGTATGGGGGTAAATAAGAACGGAAAAGTTTATATTTTATTACCAGGGCCGCCAAAAGAAATGAAACCAATGTAT
GTAAGTTACGTAGAGCCTTTTTTACGTAATTTTACAACAGGAGAAAACATTTATTCTCGTGTGCTTCGTTTCTTCGGTAT
TGGGGAGTCCCAATTAGAGGTGAAAGTGCAAGATTTAATTGATGGACAAACAAACCCAACAATCGCCCCGTTAGCAAATG
ATGGAGAAGTGACATTACGTTTAACCGCTAAGCATCAAAATGTTAGCGAAGCGGAGAAATTAATTCAACATGTGGAAGAT
TTGATTTTAGAAAGAGTAGGAGAATTTTTCTACGGATATGACCAAGAATTTTTGCATTATAAGGCAATCGAGTTATTGAA
GAGAAAAGGGTTAACTTTAGCGTGTGCAGAAAGTTTAACAGGTGGTCTTTTTGGAAATCAAGTAACTGAAAACGCTGGTG
TTTCTTCTGTATTTAAAGGCGGTGTCATTTGTTATCATAATGATGTGAAGCAACATGTTTTACGTGTGCCTGAAGAAGTA
TTGCATACTGATGGTGCAGTTAGTAAAGAATGTGCTCGTTATCTTGCTGAAAATGTTAAGGATGTATTAAAAGCGGATAT
CGGAATTAGTTTCACTGGGGTAGCAGGGCCAGATGCTTCAGAACAGAAAGAACCAGGAACAGTATTTGTTGGGCTTTCGA
TTAAGGATGAGCCAACTGTAGTCTTTCCTCTTAATTTAAGCGGAAGTCGTCAACAAATTAGAGAACGAACAGTAAAATAT
GGATTTTATCATTTATATAAAAAGCTAGAAGAGATATAA

Domains

Predicted by InterproScan.

Damage-inducible protein CinA KH domain (CinA_KH)

(179-252)

Competence-damaged protein (CinA)

(258-408)

Probable molybdopterin binding domain (MoCF_biosynth)

(5-169)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

58.01

100

0.58
  cinA Streptococcus pneumoniae TIGR4

47.017

100

0.478
  cinA Streptococcus mitis SK321

46.778

100

0.476
  cinA Streptococcus pneumoniae Rx1

46.539

100

0.473
  cinA Streptococcus pneumoniae R6

46.539

100

0.473
  cinA Streptococcus pneumoniae D39

46.301

100

0.471
  cinA Streptococcus mitis NCTC 12261

46.301

100

0.471
  cinA Streptococcus mutans UA159

45.567

98.544

0.449
  cinA Streptococcus suis isolate S10

40.318

91.505

0.369