Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   OE105_RS05375 Genome accession   NZ_CP106877
Coordinates   1145729..1146970 (-) Length   413 a.a.
NCBI ID   WP_275422102.1    Uniprot ID   A0A9E8M278
Organism   Fervidibacillus halotolerans strain MEBiC13594     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 1140729..1151970
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OE105_RS05350 (OE105_05350) - 1141416..1141865 (+) 450 Protein_1050 2-oxoacid:acceptor oxidoreductase family protein -
  OE105_RS05355 (OE105_05355) - 1141862..1142356 (+) 495 Protein_1051 pyruvate synthase -
  OE105_RS05360 (OE105_05360) - 1142716..1143408 (+) 693 WP_275421709.1 DUF1538 domain-containing protein -
  OE105_RS05365 (OE105_05365) - 1143405..1144172 (+) 768 WP_275421710.1 DUF1538 domain-containing protein -
  OE105_RS05370 (OE105_05370) - 1144129..1144854 (+) 726 WP_275421711.1 P-II family nitrogen regulator -
  OE105_RS05375 (OE105_05375) cinA 1145729..1146970 (-) 1242 WP_275422102.1 competence/damage-inducible protein A Machinery gene
  OE105_RS05380 (OE105_05380) pgsA 1147010..1147588 (-) 579 WP_275421712.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  OE105_RS05385 (OE105_05385) - 1147702..1148631 (-) 930 WP_420842574.1 helix-turn-helix domain-containing protein -
  OE105_RS05390 (OE105_05390) - 1148643..1149428 (-) 786 WP_275421714.1 DUF3388 domain-containing protein -
  OE105_RS05395 (OE105_05395) - 1149669..1149926 (-) 258 WP_275421716.1 DUF3243 domain-containing protein -
  OE105_RS05400 (OE105_05400) ymfI 1150011..1150739 (-) 729 WP_275421717.1 elongation factor P 5-aminopentanone reductase -

Sequence

Protein


Download         Length: 413 a.a.        Molecular weight: 45840.84 Da        Isoelectric Point: 8.7650

>NTDB_id=736318 OE105_RS05375 WP_275422102.1 1145729..1146970(-) (cinA) [Fervidibacillus halotolerans strain MEBiC13594]
MNAEIIAVGSELLLGQIANTNAKFLSKELATIGVNVYFHTVVGDNRNRLKNAVEIAKKRSQFILFTGGLGPTKDDLTKET
LAEIVQRDLVMDEESFQSIKAFFKKMNRTMTENNKKQAYVLAGSEVLPNDTGMAPGMVFTQDDITYMLLPGPPSELEPMF
KKYGKRSLLKRLGKCETIESKVLRFFGIGESTLEKEIEDLIDRQSNPTIAPLASDGEVTLRLTVKHSDKRKRKELIDQLE
GEILSRVGPYFYGYDETTIIDEMAKLLQVKSKRIAAAESLTGGLFQEELTSIPGASHWFQGGIVSYTNEVKIGFLGVQKE
TIDTFGAVSKQCAMEMAENVRKKMKAHIGISFTGVAGPSPLEGKNPGTVYIGISIDGKTPEAFEYHLFGNRQTIRRRAVK
VGAWEVLKQLKAE

Nucleotide


Download         Length: 1242 bp        

>NTDB_id=736318 OE105_RS05375 WP_275422102.1 1145729..1146970(-) (cinA) [Fervidibacillus halotolerans strain MEBiC13594]
ATGAATGCGGAAATTATCGCCGTAGGTTCGGAATTACTTTTAGGACAAATTGCAAATACGAATGCAAAATTTTTGTCGAA
AGAGTTAGCGACTATCGGTGTCAATGTTTATTTCCATACCGTGGTGGGGGATAATCGAAATCGATTAAAAAATGCTGTCG
AAATCGCTAAAAAGCGATCCCAATTTATTTTATTTACCGGTGGTCTCGGTCCGACGAAGGATGATTTAACAAAGGAAACT
TTGGCAGAAATCGTACAAAGAGATTTAGTAATGGATGAAGAATCCTTCCAATCGATTAAAGCCTTTTTTAAAAAAATGAA
TAGAACAATGACCGAAAATAATAAAAAGCAAGCATATGTTTTAGCAGGAAGTGAAGTTTTGCCCAATGATACGGGAATGG
CACCGGGGATGGTTTTTACACAAGATGATATTACGTATATGTTATTACCAGGGCCACCGTCAGAATTGGAGCCTATGTTT
AAAAAATATGGGAAACGATCATTATTGAAACGTTTAGGAAAATGCGAAACAATCGAGTCGAAGGTATTACGATTTTTCGG
TATCGGAGAATCCACATTAGAAAAGGAAATCGAGGATTTAATCGATCGCCAGTCCAACCCGACAATCGCTCCATTAGCAT
CGGATGGTGAAGTAACCTTGCGACTGACGGTGAAACATTCTGATAAAAGGAAACGCAAGGAGTTAATTGACCAATTGGAA
GGGGAAATTTTATCTCGAGTCGGTCCTTATTTTTATGGTTACGATGAGACGACGATTATAGATGAAATGGCAAAGCTTCT
CCAAGTGAAGAGTAAAAGGATCGCTGCGGCAGAAAGTTTGACTGGGGGATTATTTCAAGAGGAACTGACTTCCATTCCCG
GTGCTAGTCATTGGTTCCAAGGTGGTATTGTTTCCTATACAAACGAAGTAAAGATCGGCTTTCTTGGCGTTCAGAAGGAA
ACGATTGATACCTTTGGAGCAGTAAGTAAACAATGTGCAATGGAAATGGCTGAAAATGTAAGAAAAAAGATGAAAGCACA
TATTGGAATCAGTTTTACCGGAGTAGCTGGACCGTCGCCGTTAGAAGGGAAAAATCCTGGAACGGTCTATATTGGAATTT
CCATAGACGGAAAAACACCCGAAGCCTTTGAATACCATCTTTTTGGAAATCGGCAAACGATTCGTCGGAGAGCGGTTAAA
GTTGGGGCTTGGGAAGTCTTGAAGCAACTAAAAGCCGAATGA

Domains

Predicted by InterproScan.

Damage-inducible protein CinA KH domain (CinA_KH)

(180-253)

Competence-damaged protein (CinA)

(258-403)

Probable molybdopterin binding domain (MoCF_biosynth)

(5-164)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

59.658

99.031

0.591
  cinA Streptococcus mutans UA159

45.652

100

0.458
  cinA Streptococcus pneumoniae TIGR4

45.966

99.031

0.455
  cinA Streptococcus pneumoniae Rx1

45.721

99.031

0.453
  cinA Streptococcus pneumoniae R6

45.721

99.031

0.453
  cinA Streptococcus mitis NCTC 12261

45.477

99.031

0.45
  cinA Streptococcus pneumoniae D39

45.477

99.031

0.45
  cinA Streptococcus mitis SK321

46.997

92.736

0.436
  cinA Streptococcus suis isolate S10

40.144

100

0.404