Detailed information
Bioinformatically predicted
Overview
| Name | cinA | Type | Machinery gene |
| Locus tag | N5101_RS14365 | Genome accession | NZ_CP104753 |
| Coordinates | 3030128..3031390 (-) | Length | 420 a.a. |
| NCBI ID | WP_003641503.1 | Uniprot ID | - |
| Organism | Lactiplantibacillus plantarum strain MGEL20154 | ||
| Function | facilitate localization of RecA (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 3025128..3036390
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5101_RS14350 | - | 3026173..3026979 (-) | 807 | WP_003641506.1 | TIGR00282 family metallophosphoesterase | - |
| N5101_RS14355 | rny | 3027104..3028663 (-) | 1560 | WP_003644638.1 | ribonuclease Y | - |
| N5101_RS14360 | recA | 3028894..3030036 (-) | 1143 | WP_003641504.1 | recombinase RecA | Machinery gene |
| N5101_RS14365 | cinA | 3030128..3031390 (-) | 1263 | WP_003641503.1 | competence/damage-inducible protein A | Machinery gene |
| N5101_RS14370 | pgsA | 3031662..3032246 (-) | 585 | WP_003641502.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| N5101_RS14375 | - | 3032269..3033141 (-) | 873 | WP_003641501.1 | RodZ domain-containing protein | - |
| N5101_RS14380 | yfmH | 3033245..3034546 (-) | 1302 | WP_003641500.1 | EF-P 5-aminopentanol modification-associated protein YfmH | - |
| N5101_RS14385 | yfmF | 3034543..3035808 (-) | 1266 | WP_003644641.1 | EF-P 5-aminopentanol modification-associated protein YfmF | - |
Sequence
Protein
Download Length: 420 a.a. Molecular weight: 45171.26 Da Isoelectric Point: 5.6636
>NTDB_id=732015 N5101_RS14365 WP_003641503.1 3030128..3031390(-) (cinA) [Lactiplantibacillus plantarum strain MGEL20154]
MQAEIIAVGTEILLGQITNTNSTYIARGLAELGIDSYYQTVVGDNRQRLSTVIEIAAQRNDLVILTGGLGPTKDDLTKQT
LAHYLNVALVEDQAAMQKITAWFATNDKVMTANNRLQALYPAGAQPLTNHNGMAVGAFYQSENSADFLLLPGPPRELAVM
FDSEAKPKLAAAYGEQAQIYSRVMRFYGISESELATRLHPLIDEQQAVTIAPYAKTNEVTLRLSAQAMTETAARGMIDKV
DHQIKATIGPYFYGYGDDNSLVTTVINQMIAAKLSITAAESLTAGLFQSTIGSVSGVSAIFPGGFVTYANEAKHQLVNVP
QAIIDAEGVVSEATAKAMASGAKQQLNTDVGISFTGVAGPGTLEGQPAGTVWIGLAYRDRPVKAKQYHFAGNRQQIRERS
VMAGLDLLRHALNEDTDLKK
MQAEIIAVGTEILLGQITNTNSTYIARGLAELGIDSYYQTVVGDNRQRLSTVIEIAAQRNDLVILTGGLGPTKDDLTKQT
LAHYLNVALVEDQAAMQKITAWFATNDKVMTANNRLQALYPAGAQPLTNHNGMAVGAFYQSENSADFLLLPGPPRELAVM
FDSEAKPKLAAAYGEQAQIYSRVMRFYGISESELATRLHPLIDEQQAVTIAPYAKTNEVTLRLSAQAMTETAARGMIDKV
DHQIKATIGPYFYGYGDDNSLVTTVINQMIAAKLSITAAESLTAGLFQSTIGSVSGVSAIFPGGFVTYANEAKHQLVNVP
QAIIDAEGVVSEATAKAMASGAKQQLNTDVGISFTGVAGPGTLEGQPAGTVWIGLAYRDRPVKAKQYHFAGNRQQIRERS
VMAGLDLLRHALNEDTDLKK
Nucleotide
Download Length: 1263 bp
>NTDB_id=732015 N5101_RS14365 WP_003641503.1 3030128..3031390(-) (cinA) [Lactiplantibacillus plantarum strain MGEL20154]
ATGCAAGCAGAAATAATCGCGGTTGGTACCGAGATTTTACTGGGTCAGATTACGAACACGAATAGTACGTACATCGCACG
TGGATTGGCCGAATTAGGAATTGATAGCTATTATCAAACGGTGGTTGGTGATAATCGGCAACGTTTGTCGACCGTCATTG
AAATTGCGGCCCAGCGGAATGACTTAGTTATTTTAACGGGTGGTTTGGGGCCGACCAAGGATGACTTGACGAAGCAGACG
CTCGCGCATTATTTGAATGTTGCCTTGGTTGAAGATCAGGCAGCAATGCAAAAAATTACGGCCTGGTTTGCCACTAATGA
CAAAGTAATGACGGCCAACAACCGATTACAGGCATTGTATCCGGCAGGCGCGCAACCGTTGACTAATCATAACGGAATGG
CTGTTGGTGCGTTTTATCAGTCAGAAAATAGTGCTGATTTCTTGTTATTGCCAGGTCCACCCCGTGAGTTAGCCGTAATG
TTTGATTCTGAGGCAAAACCGAAATTGGCAGCTGCATATGGGGAACAAGCCCAAATCTATTCGCGAGTGATGCGTTTTTA
TGGCATCAGTGAGTCTGAATTGGCGACCCGGTTGCACCCCTTGATTGATGAACAGCAGGCGGTTACGATCGCACCCTATG
CCAAGACTAACGAGGTTACCCTCAGATTGAGTGCCCAAGCTATGACGGAAACGGCTGCAAGGGGAATGATCGACAAAGTT
GACCACCAGATCAAGGCTACCATTGGGCCGTACTTTTACGGTTATGGAGACGATAACTCGTTAGTTACTACTGTTATTAA
TCAAATGATTGCGGCTAAGCTGAGTATTACAGCCGCTGAAAGCTTAACAGCTGGGCTGTTTCAGAGTACCATCGGCAGTG
TGTCCGGGGTCTCCGCAATCTTTCCGGGCGGCTTTGTAACGTATGCGAATGAGGCCAAACATCAGCTAGTGAACGTTCCA
CAAGCAATTATTGACGCTGAGGGCGTGGTTTCAGAAGCGACCGCTAAGGCCATGGCGAGTGGTGCTAAGCAGCAGCTAAA
TACTGATGTTGGTATCAGTTTTACAGGCGTTGCCGGTCCAGGAACCTTGGAAGGTCAACCGGCTGGAACGGTATGGATTG
GTCTTGCTTACCGTGATCGACCCGTGAAGGCCAAGCAGTACCATTTTGCTGGTAATCGACAACAAATTCGGGAACGCAGT
GTGATGGCCGGGTTAGACCTATTGAGACATGCATTGAATGAAGATACGGACTTAAAAAAATAA
ATGCAAGCAGAAATAATCGCGGTTGGTACCGAGATTTTACTGGGTCAGATTACGAACACGAATAGTACGTACATCGCACG
TGGATTGGCCGAATTAGGAATTGATAGCTATTATCAAACGGTGGTTGGTGATAATCGGCAACGTTTGTCGACCGTCATTG
AAATTGCGGCCCAGCGGAATGACTTAGTTATTTTAACGGGTGGTTTGGGGCCGACCAAGGATGACTTGACGAAGCAGACG
CTCGCGCATTATTTGAATGTTGCCTTGGTTGAAGATCAGGCAGCAATGCAAAAAATTACGGCCTGGTTTGCCACTAATGA
CAAAGTAATGACGGCCAACAACCGATTACAGGCATTGTATCCGGCAGGCGCGCAACCGTTGACTAATCATAACGGAATGG
CTGTTGGTGCGTTTTATCAGTCAGAAAATAGTGCTGATTTCTTGTTATTGCCAGGTCCACCCCGTGAGTTAGCCGTAATG
TTTGATTCTGAGGCAAAACCGAAATTGGCAGCTGCATATGGGGAACAAGCCCAAATCTATTCGCGAGTGATGCGTTTTTA
TGGCATCAGTGAGTCTGAATTGGCGACCCGGTTGCACCCCTTGATTGATGAACAGCAGGCGGTTACGATCGCACCCTATG
CCAAGACTAACGAGGTTACCCTCAGATTGAGTGCCCAAGCTATGACGGAAACGGCTGCAAGGGGAATGATCGACAAAGTT
GACCACCAGATCAAGGCTACCATTGGGCCGTACTTTTACGGTTATGGAGACGATAACTCGTTAGTTACTACTGTTATTAA
TCAAATGATTGCGGCTAAGCTGAGTATTACAGCCGCTGAAAGCTTAACAGCTGGGCTGTTTCAGAGTACCATCGGCAGTG
TGTCCGGGGTCTCCGCAATCTTTCCGGGCGGCTTTGTAACGTATGCGAATGAGGCCAAACATCAGCTAGTGAACGTTCCA
CAAGCAATTATTGACGCTGAGGGCGTGGTTTCAGAAGCGACCGCTAAGGCCATGGCGAGTGGTGCTAAGCAGCAGCTAAA
TACTGATGTTGGTATCAGTTTTACAGGCGTTGCCGGTCCAGGAACCTTGGAAGGTCAACCGGCTGGAACGGTATGGATTG
GTCTTGCTTACCGTGATCGACCCGTGAAGGCCAAGCAGTACCATTTTGCTGGTAATCGACAACAAATTCGGGAACGCAGT
GTGATGGCCGGGTTAGACCTATTGAGACATGCATTGAATGAAGATACGGACTTAAAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| cinA | Streptococcus mitis SK321 |
48.349 |
100 |
0.488 |
| cinA | Streptococcus pneumoniae TIGR4 |
48.113 |
100 |
0.486 |
| cinA | Streptococcus pneumoniae Rx1 |
48.113 |
100 |
0.486 |
| cinA | Streptococcus pneumoniae R6 |
48.113 |
100 |
0.486 |
| cinA | Streptococcus pneumoniae D39 |
47.877 |
100 |
0.483 |
| cinA | Streptococcus mitis NCTC 12261 |
47.17 |
100 |
0.476 |
| cinA | Streptococcus mutans UA159 |
47.952 |
98.81 |
0.474 |
| cinA | Bacillus subtilis subsp. subtilis str. 168 |
44.31 |
98.333 |
0.436 |
| cinA | Streptococcus suis isolate S10 |
39.423 |
99.048 |
0.39 |