Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | NRL00_RS17130 | Genome accession | NZ_CP102327 |
| Coordinates | 3790820..3791140 (+) | Length | 106 a.a. |
| NCBI ID | WP_094696585.1 | Uniprot ID | - |
| Organism | Aeromonas dhakensis strain BC05 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3785820..3796140
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NRL00_RS17105 (NRL00_17105) | trhA | 3786456..3787091 (-) | 636 | WP_010636289.1 | PAQR family membrane homeostasis protein TrhA | - |
| NRL00_RS17110 (NRL00_17110) | - | 3787310..3788815 (+) | 1506 | WP_268009567.1 | pyridoxal-dependent decarboxylase | - |
| NRL00_RS17115 (NRL00_17115) | - | 3788920..3789483 (+) | 564 | WP_005309592.1 | septation protein A | - |
| NRL00_RS17120 (NRL00_17120) | - | 3789508..3789804 (+) | 297 | WP_005309589.1 | YciI family protein | - |
| NRL00_RS17125 (NRL00_17125) | cysQ | 3789883..3790653 (-) | 771 | WP_268009568.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| NRL00_RS17130 (NRL00_17130) | comEA | 3790820..3791140 (+) | 321 | WP_094696585.1 | ComEA family DNA-binding protein | Machinery gene |
| NRL00_RS17135 (NRL00_17135) | galU | 3791235..3792146 (+) | 912 | WP_139726426.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| NRL00_RS17140 (NRL00_17140) | - | 3792360..3793757 (+) | 1398 | WP_011707249.1 | peptide MFS transporter | - |
| NRL00_RS17145 (NRL00_17145) | - | 3793830..3794801 (-) | 972 | WP_005309570.1 | response regulator | - |
| NRL00_RS17150 (NRL00_17150) | - | 3795157..3795834 (+) | 678 | WP_043171750.1 | DnaT-like ssDNA-binding domain-containing protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11153.00 Da Isoelectric Point: 9.5773
>NTDB_id=716169 NRL00_RS17130 WP_094696585.1 3790820..3791140(+) (comEA) [Aeromonas dhakensis strain BC05]
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVAAAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVAAAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=716169 NRL00_RS17130 WP_094696585.1 3790820..3791140(+) (comEA) [Aeromonas dhakensis strain BC05]
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCGCTGCTCAGCCAGCCCCTGCTGGCCGCCGACAA
GCCCGCCGCCAAACCGGCCACCACGGTTGCCGCCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACCGCCAGTATCAACG
AGTTGACTGCACTCAAGGGCATCGGCGAGAAGAAGGCACAGGCTATCGTCGATTATCGCGAGAAACAGGGCAAGTTCACC
ACTGTTGACCAGCTTGCCGATGTCAGCGGTATCGGGCCGGCCACGCTGGAAGCAAATCGGGACATGATCATCGTCAAGTA
A
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCGCTGCTCAGCCAGCCCCTGCTGGCCGCCGACAA
GCCCGCCGCCAAACCGGCCACCACGGTTGCCGCCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACCGCCAGTATCAACG
AGTTGACTGCACTCAAGGGCATCGGCGAGAAGAAGGCACAGGCTATCGTCGATTATCGCGAGAAACAGGGCAAGTTCACC
ACTGTTGACCAGCTTGCCGATGTCAGCGGTATCGGGCCGGCCACGCTGGAAGCAAATCGGGACATGATCATCGTCAAGTA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae strain A1552 |
53.636 |
100 |
0.557 |
| comEA | Vibrio cholerae C6706 |
53.636 |
100 |
0.557 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
45.045 |
100 |
0.472 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
46.392 |
91.509 |
0.425 |
| comEA | Legionella pneumophila strain ERS1305867 |
41.837 |
92.453 |
0.387 |
| comEA | Legionella pneumophila str. Paris |
41.837 |
92.453 |
0.387 |
| comEA | Vibrio campbellii strain DS40M4 |
41 |
94.34 |
0.387 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
63.492 |
59.434 |
0.377 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
51.316 |
71.698 |
0.368 |