Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | NRL03_RS17130 | Genome accession | NZ_CP102315 |
| Coordinates | 3683684..3684001 (+) | Length | 105 a.a. |
| NCBI ID | WP_039041323.1 | Uniprot ID | A0AAJ5ZCA1 |
| Organism | Aeromonas caviae strain BC01 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3678684..3689001
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NRL03_RS17105 (NRL03_17135) | - | 3678764..3680269 (+) | 1506 | WP_337984017.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| NRL03_RS17110 (NRL03_17140) | - | 3680375..3680926 (+) | 552 | WP_270835910.1 | septation protein A | - |
| NRL03_RS17115 (NRL03_17145) | - | 3680951..3681247 (+) | 297 | WP_201889166.1 | YciI family protein | - |
| NRL03_RS17120 (NRL03_17150) | - | 3681301..3682629 (-) | 1329 | WP_053288733.1 | IS4 family transposase | - |
| NRL03_RS17125 (NRL03_17155) | cysQ | 3682749..3683519 (-) | 771 | WP_039041322.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| NRL03_RS17130 (NRL03_17160) | comEA | 3683684..3684001 (+) | 318 | WP_039041323.1 | ComEA family DNA-binding protein | Machinery gene |
| NRL03_RS17135 (NRL03_17165) | galU | 3684096..3685007 (+) | 912 | WP_010675542.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| NRL03_RS17140 (NRL03_17170) | - | 3685221..3686618 (+) | 1398 | WP_128296713.1 | peptide MFS transporter | - |
| NRL03_RS17145 (NRL03_17175) | - | 3686688..3687659 (-) | 972 | WP_029314797.1 | response regulator | - |
| NRL03_RS17150 (NRL03_17180) | - | 3687935..3688609 (+) | 675 | WP_337984272.1 | DnaT-like ssDNA-binding domain-containing protein | - |
Sequence
Protein
Download Length: 105 a.a. Molecular weight: 10966.84 Da Isoelectric Point: 10.1059
>NTDB_id=716057 NRL03_RS17130 WP_039041323.1 3683684..3684001(+) (comEA) [Aeromonas caviae strain BC01]
MNKKTLIAALLLGCLPLLSQPLLAADKAATKPVATTQVKESGKINLNTASAGELTALKGIGEKKAQAIIDHREKQGKFTS
VDQLADVSGIGSATLEANRDMIIVK
MNKKTLIAALLLGCLPLLSQPLLAADKAATKPVATTQVKESGKINLNTASAGELTALKGIGEKKAQAIIDHREKQGKFTS
VDQLADVSGIGSATLEANRDMIIVK
Nucleotide
Download Length: 318 bp
>NTDB_id=716057 NRL03_RS17130 WP_039041323.1 3683684..3684001(+) (comEA) [Aeromonas caviae strain BC01]
ATGAACAAGAAGACCCTGATCGCCGCACTGCTGCTGGGCTGCCTCCCCCTGTTGAGCCAACCTCTGCTGGCCGCCGACAA
GGCGGCGACCAAGCCTGTGGCCACCACCCAAGTCAAGGAGAGCGGCAAGATCAATCTCAATACCGCCAGTGCCGGCGAGC
TCACCGCCCTGAAGGGCATTGGCGAGAAGAAGGCACAGGCCATCATCGACCACAGAGAGAAGCAGGGCAAGTTCACCTCC
GTCGATCAACTGGCGGACGTCAGTGGCATCGGATCGGCCACGCTGGAAGCAAACCGGGACATGATTATCGTCAAGTAA
ATGAACAAGAAGACCCTGATCGCCGCACTGCTGCTGGGCTGCCTCCCCCTGTTGAGCCAACCTCTGCTGGCCGCCGACAA
GGCGGCGACCAAGCCTGTGGCCACCACCCAAGTCAAGGAGAGCGGCAAGATCAATCTCAATACCGCCAGTGCCGGCGAGC
TCACCGCCCTGAAGGGCATTGGCGAGAAGAAGGCACAGGCCATCATCGACCACAGAGAGAAGCAGGGCAAGTTCACCTCC
GTCGATCAACTGGCGGACGTCAGTGGCATCGGATCGGCCACGCTGGAAGCAAACCGGGACATGATTATCGTCAAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
50 |
100 |
0.505 |
| comEA | Vibrio cholerae strain A1552 |
50 |
100 |
0.505 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
47.664 |
100 |
0.486 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
45.045 |
100 |
0.476 |
| comEA | Legionella pneumophila strain ERS1305867 |
44 |
95.238 |
0.419 |
| comEA | Legionella pneumophila str. Paris |
44 |
95.238 |
0.419 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
51.852 |
77.143 |
0.4 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
43.75 |
91.429 |
0.4 |
| comEA/celA/cilE | Streptococcus mitis SK321 |
54.795 |
69.524 |
0.381 |