Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | NGC85_RS01655 | Genome accession | NZ_CP101115 |
| Coordinates | 359551..360042 (+) | Length | 163 a.a. |
| NCBI ID | WP_254804641.1 | Uniprot ID | - |
| Organism | Acinetobacter sp. Z1 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 354551..365042
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NGC85_RS01635 (NGC85_01635) | - | 355855..356745 (+) | 891 | WP_005059930.1 | metal-dependent hydrolase | - |
| NGC85_RS01640 (NGC85_01640) | - | 356924..357514 (+) | 591 | WP_254804638.1 | LemA family protein | - |
| NGC85_RS01645 (NGC85_01645) | - | 357551..358600 (+) | 1050 | WP_254804639.1 | YgcG family protein | - |
| NGC85_RS01650 (NGC85_01650) | - | 358594..359154 (+) | 561 | WP_254804640.1 | TPM domain-containing protein | - |
| NGC85_RS01655 (NGC85_01655) | pilA | 359551..360042 (+) | 492 | WP_254804641.1 | pilin | Machinery gene |
| NGC85_RS01660 (NGC85_01660) | pilA | 360316..360807 (+) | 492 | WP_254804642.1 | pilin | Machinery gene |
| NGC85_RS01665 (NGC85_01665) | - | 360830..362518 (+) | 1689 | WP_254804643.1 | PglL family O-oligosaccharyltransferase | - |
| NGC85_RS01670 (NGC85_01670) | tfpZ | 362582..363316 (+) | 735 | WP_254804644.1 | TfpX/TfpZ family type IV pilin accessory protein | - |
| NGC85_RS01675 (NGC85_01675) | - | 363398..365038 (+) | 1641 | WP_254804645.1 | PglL family O-oligosaccharyltransferase | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 16202.54 Da Isoelectric Point: 9.5582
>NTDB_id=708719 NGC85_RS01655 WP_254804641.1 359551..360042(+) (pilA) [Acinetobacter sp. Z1]
MKSMQKGFTLIELMIVVAIIGILAAVAIPAYQDYTVRAKVTEGLSLASSAKTAVSENAANATAFGSGWTAPSQTPNVSSV
SIASANGRITIAYTTAVAVAGSNTLILSPLNGDRATGTALVQGTPPAAGSITWVCRSAGAATTVAAAGVGTLAAKYAPAE
CRN
MKSMQKGFTLIELMIVVAIIGILAAVAIPAYQDYTVRAKVTEGLSLASSAKTAVSENAANATAFGSGWTAPSQTPNVSSV
SIASANGRITIAYTTAVAVAGSNTLILSPLNGDRATGTALVQGTPPAAGSITWVCRSAGAATTVAAAGVGTLAAKYAPAE
CRN
Nucleotide
Download Length: 492 bp
>NTDB_id=708719 NGC85_RS01655 WP_254804641.1 359551..360042(+) (pilA) [Acinetobacter sp. Z1]
ATGAAATCAATGCAAAAGGGTTTTACTCTAATCGAATTGATGATCGTTGTAGCGATTATCGGTATTTTAGCTGCAGTAGC
AATTCCTGCTTATCAGGACTATACGGTGCGGGCTAAAGTTACTGAGGGTTTATCTTTAGCTTCTAGTGCTAAAACTGCAG
TATCTGAAAATGCTGCAAATGCAACAGCATTTGGTAGTGGTTGGACTGCACCATCACAAACACCAAATGTATCAAGTGTT
TCAATTGCTTCTGCAAATGGCCGTATTACGATTGCATATACAACGGCTGTTGCTGTTGCGGGTAGTAATACATTAATTTT
AAGTCCGTTAAATGGTGATCGTGCAACGGGTACAGCATTAGTACAAGGTACTCCTCCTGCTGCTGGTTCTATTACATGGG
TATGTCGTTCTGCTGGTGCAGCAACAACTGTTGCTGCAGCTGGAGTAGGTACTTTAGCAGCTAAGTACGCGCCTGCTGAA
TGCCGAAACTAA
ATGAAATCAATGCAAAAGGGTTTTACTCTAATCGAATTGATGATCGTTGTAGCGATTATCGGTATTTTAGCTGCAGTAGC
AATTCCTGCTTATCAGGACTATACGGTGCGGGCTAAAGTTACTGAGGGTTTATCTTTAGCTTCTAGTGCTAAAACTGCAG
TATCTGAAAATGCTGCAAATGCAACAGCATTTGGTAGTGGTTGGACTGCACCATCACAAACACCAAATGTATCAAGTGTT
TCAATTGCTTCTGCAAATGGCCGTATTACGATTGCATATACAACGGCTGTTGCTGTTGCGGGTAGTAATACATTAATTTT
AAGTCCGTTAAATGGTGATCGTGCAACGGGTACAGCATTAGTACAAGGTACTCCTCCTGCTGCTGGTTCTATTACATGGG
TATGTCGTTCTGCTGGTGCAGCAACAACTGTTGCTGCAGCTGGAGTAGGTACTTTAGCAGCTAAGTACGCGCCTGCTGAA
TGCCGAAACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Ralstonia pseudosolanacearum GMI1000 |
57.738 |
100 |
0.595 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
53.988 |
100 |
0.54 |
| pilA2 | Legionella pneumophila str. Paris |
53.374 |
100 |
0.534 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
44.149 |
100 |
0.509 |
| comP | Acinetobacter baylyi ADP1 |
44.937 |
96.933 |
0.436 |
| pilE | Neisseria gonorrhoeae MS11 |
38.824 |
100 |
0.405 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
36.994 |
100 |
0.393 |