Detailed information NTG0708714

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: NGC85_RS01585
• Genome accession: NZ_CP101115
• Coordinates: 341518..342576 (+)
• Length: 352 a.a.
• NCBI ID: WP_254804633.1
• Uniprot ID: -
• Organism: Acinetobacter sp. Z1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 336518..347576

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NGC85_RS01570 (NGC85_01570)	mraY	336757..337875 (+)	1119	WP_005052225.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-
NGC85_RS01575 (NGC85_01575)	-	337934..338752 (+)	819	WP_254804631.1	putative RNA methyltransferase	-
NGC85_RS01580 (NGC85_01580)	ponA	338767..341355 (-)	2589	WP_254804632.1	penicillin-binding protein PBP1a	-
NGC85_RS01585 (NGC85_01585)	comM	341518..342576 (+)	1059	WP_254804633.1	pilus assembly protein PilM	Machinery gene
NGC85_RS01590 (NGC85_01590)	pilN	342576..343220 (+)	645	WP_005059945.1	PilN domain-containing protein	Machinery gene
NGC85_RS01595 (NGC85_01595)	comO	343217..343951 (+)	735	WP_005052213.1	type 4a pilus biogenesis protein PilO	Machinery gene
NGC85_RS01600 (NGC85_01600)	pilP	343954..344481 (+)	528	WP_169109293.1	pilus assembly protein PilP	Machinery gene
NGC85_RS01605 (NGC85_01605)	pilQ	344498..346675 (+)	2178	WP_254804634.1	type IV pilus secretin PilQ	Machinery gene
NGC85_RS01610 (NGC85_01610)	aroK	346686..347252 (+)	567	WP_155757334.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39047.81 Da
• Isoelectric Point: 4.6406

>NTDB_id=708714 NGC85_RS01585 WP_254804633.1 341518..342576(+) (comM) [Acinetobacter sp. Z1]
MLRLYRKPNKGLVGVDISSTTVKLLELSVKNGRYWVESYAVMPLPENSVVEKSILNPEAVGDALERVVNLANPHTMNVAI
AVPTSMVIHKIIEMDADMTADEREVQIRMDAEQYIPFPLDEVSLDFEVLSDKLANPNRVNVLLVATRTENVDTRVEVLEL
AGLTAKIADVESYAMERAFSVFSDTLPMGANTVGILDIGHTMTTLSVMQKGKIIYTREQVFGGRQLTQDVQTRYGLSFEE
AGRAKKERTLPDDYDTEVLEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQIDIKKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=708714 NGC85_RS01585 WP_254804633.1 341518..342576(+) (comM) [Acinetobacter sp. Z1]
GTGCTCAGGTTATATCGTAAACCAAATAAGGGGTTAGTGGGGGTCGATATTAGTTCGACAACTGTTAAATTATTGGAGCT
CTCTGTAAAGAACGGTAGATATTGGGTTGAAAGTTATGCTGTGATGCCGCTGCCTGAAAACAGTGTTGTCGAAAAAAGCA
TTTTAAATCCAGAAGCAGTAGGTGATGCCCTTGAAAGAGTGGTGAATCTTGCGAATCCTCACACCATGAATGTGGCGATT
GCGGTACCTACCTCAATGGTGATTCATAAAATCATTGAGATGGATGCTGACATGACAGCAGATGAACGAGAAGTTCAAAT
TCGCATGGATGCCGAGCAATACATTCCGTTCCCATTAGATGAAGTTAGTCTTGATTTTGAAGTCTTATCTGACAAATTAG
CCAATCCAAACCGAGTGAATGTACTTTTGGTGGCAACACGCACTGAAAATGTAGATACACGAGTAGAAGTTTTAGAGCTT
GCGGGATTGACTGCTAAAATTGCTGATGTTGAAAGTTATGCCATGGAGCGCGCATTTAGTGTGTTTTCAGACACACTTCC
AATGGGCGCCAATACCGTTGGTATCCTAGATATTGGCCATACCATGACAACCTTATCTGTGATGCAGAAAGGCAAAATCA
TTTATACGCGGGAACAAGTCTTTGGTGGTCGACAATTGACCCAAGATGTTCAAACTCGATATGGTTTGTCTTTTGAGGAA
GCGGGTCGAGCGAAAAAAGAACGAACGCTTCCTGATGATTATGATACTGAAGTTCTTGAGCCTTTTTTAGATGCTGTTGT
ACAACAAGCAGCCCGTTCACTACAGTTCTTCTTTTCCTCGTCACAATTTAATGAAATTGATCATATTTTGCTGGCTGGTG
GTAATGCAAATATTCCTGGTTTAGCGAAGTTATTACAACAAAAACTCGGTTACCGCGTAACGATTGCCAATCCATTTTTA
CAAATGGGCTTTTCTCCGCAAATTGATATTAAAAAAATTGAAAACGATGCCTCATCATTAATGGTGGCATGTGGTTTAGC
ATTGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	87.5	100	0.875
pilM	Acinetobacter baumannii D1279779	87.216	100	0.872
comM	Acinetobacter baylyi ADP1	83.523	100	0.835
pilM	Legionella pneumophila strain ERS1305867	41.525	100	0.418