Detailed information NTG0692170

Bioinformatically predicted

Overview

• Name: cinA
• Type: Machinery gene
• Locus tag: MF626_RS09110
• Genome accession: NZ_CP097770
• Coordinates: 2109363..2110631 (-)
• Length: 422 a.a.
• NCBI ID: WP_250261587.1
• Uniprot ID: -
• Organism: Paenibacillus polymyxa strain R 4.5
• Function: facilitate localization of RecA (predicted from homology) Homologous recombination

Genomic Context

Location: 2104363..2115631

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MF626_RS09095 (MF626_001813)	rny	2105195..2106739 (-)	1545	WP_013309958.1	ribonuclease Y	-
MF626_RS09100 (MF626_001814)	-	2107114..2107863 (-)	750	WP_250261586.1	regulatory protein RecX	-
MF626_RS09105 (MF626_001815)	recA	2108060..2109121 (-)	1062	WP_023988239.1	recombinase RecA	Machinery gene
MF626_RS09110 (MF626_001816)	cinA	2109363..2110631 (-)	1269	WP_250261587.1	competence/damage-inducible protein A	Machinery gene
MF626_RS09115 (MF626_001817)	pgsA	2110727..2111314 (-)	588	WP_013309954.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
MF626_RS09120 (MF626_001818)	-	2111525..2112016 (-)	492	WP_013309953.1	YajQ family cyclic di-GMP-binding protein	-
MF626_RS09125 (MF626_001819)	-	2112161..2112325 (-)	165	WP_023988236.1	hypothetical protein	-
MF626_RS09130 (MF626_001820)	-	2112410..2113474 (-)	1065	WP_250261588.1	helix-turn-helix domain-containing protein	-
MF626_RS09135 (MF626_001821)	-	2113505..2114278 (-)	774	WP_013370747.1	DUF3388 domain-containing protein	-
MF626_RS09140 (MF626_001822)	-	2114506..2114760 (-)	255	WP_013309950.1	DUF3243 domain-containing protein	-
MF626_RS09145 (MF626_001823)	ymfI	2114861..2115628 (-)	768	WP_061829423.1	elongation factor P 5-aminopentanone reductase	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46405.38 Da
• Isoelectric Point: 4.7819

>NTDB_id=692170 MF626_RS09110 WP_250261587.1 2109363..2110631(-) (cinA) [Paenibacillus polymyxa strain R 4.5]
MKAEIIAVGTELLLGQIVNTNAQYLSQELATIGIDVYFQTVVGDNIDRLQEAIRIAQKRADIILFSGGLGPTQDDLTKEA
IAAVLGRKLHIDRLAMDKLDQFFRNRGVEMTENNRRQALSIEGATPLENETGLAVGDAIAQDGKFYVVLPGPPKELKPMF
ANHAKPWLLQQALSGEEMPIYSKMLKFAGIGESALETHLLDLIQSQTDPTIAPYAKEGEVTIRISTKAASESEALIKLTA
TEVEIQQRLSEYMYASEDVALEKVIVDLMAKRELTVSAAESCTGGMLMEQITSIPGSAAMFQGGIVCYSNEMKMKLLNVP
YDYLEGDHAPGAVSKEVALVLAEQARMIMDSDFGLSVTGVAGPGYSERKPVGLVYIGIAERDKETEVHELRLSGNRETIR
LRSVKAILYRLWRRLVENEKLS

Nucleotide

• Length: 1269 bp

>NTDB_id=692170 MF626_RS09110 WP_250261587.1 2109363..2110631(-) (cinA) [Paenibacillus polymyxa strain R 4.5]
ATGAAAGCTGAAATAATTGCAGTAGGAACAGAGTTATTACTCGGACAAATAGTGAATACAAATGCTCAATATTTGTCACA
AGAGCTGGCTACAATTGGAATCGATGTATATTTTCAGACTGTGGTTGGCGATAACATAGATCGGCTTCAGGAAGCGATAA
GAATTGCTCAGAAGCGTGCGGATATTATTTTGTTTTCCGGCGGTCTGGGGCCGACTCAGGATGATTTGACGAAAGAGGCG
ATAGCGGCTGTATTGGGGCGGAAATTGCACATAGATCGTCTTGCAATGGACAAGCTAGATCAATTTTTCCGTAACCGTGG
GGTAGAAATGACCGAGAATAACCGCCGGCAGGCGCTTTCTATTGAAGGTGCTACTCCGCTTGAAAATGAGACAGGGCTAG
CTGTGGGCGACGCGATTGCACAGGACGGTAAATTTTATGTAGTTTTGCCTGGACCGCCTAAGGAACTCAAACCCATGTTT
GCAAACCATGCGAAACCTTGGTTGCTTCAGCAGGCATTGAGCGGTGAGGAAATGCCAATTTATTCGAAAATGCTAAAATT
TGCAGGGATCGGTGAGTCAGCTCTTGAAACCCATTTGTTAGATCTGATCCAATCCCAGACAGATCCTACGATTGCTCCTT
ATGCCAAGGAAGGGGAAGTCACGATCCGTATATCCACCAAGGCGGCCAGCGAAAGTGAAGCATTAATTAAGTTGACAGCT
ACGGAAGTAGAAATTCAGCAGCGTCTTTCGGAGTATATGTATGCAAGCGAGGATGTTGCGCTGGAGAAGGTTATCGTAGA
TCTAATGGCCAAACGCGAACTCACTGTGAGTGCGGCAGAAAGCTGTACAGGTGGAATGCTGATGGAACAGATTACTTCTA
TACCTGGCAGTGCTGCTATGTTTCAAGGTGGCATCGTGTGCTATTCCAATGAAATGAAGATGAAGTTACTCAACGTGCCT
TATGATTATTTGGAAGGGGACCATGCGCCAGGCGCAGTGAGTAAGGAAGTAGCCCTTGTGCTTGCAGAGCAGGCGAGAAT
GATCATGGATAGCGATTTTGGACTTTCAGTTACTGGTGTAGCTGGGCCTGGGTATTCCGAACGGAAGCCAGTCGGTCTAG
TGTATATTGGCATTGCTGAACGCGACAAGGAAACGGAAGTACATGAACTGAGACTGAGTGGCAACCGTGAAACAATCCGA
CTGCGATCAGTCAAAGCAATCCTGTACAGATTGTGGCGCAGGCTGGTAGAGAACGAGAAACTCTCTTAA

Domains

Predicted by InterproScan.

• Competence-damaged protein (CinA) (260-414)

• Probable molybdopterin binding domain (MoCF_biosynth) (5-168)

• Damage-inducible protein CinA KH domain (CinA_KH) (182-255)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cinA	Streptococcus mitis SK321	49.756	97.156	0.483
cinA	Streptococcus pneumoniae TIGR4	49.512	97.156	0.481
cinA	Streptococcus mitis NCTC 12261	49.268	97.156	0.479
cinA	Streptococcus pneumoniae Rx1	49.268	97.156	0.479
cinA	Streptococcus pneumoniae R6	49.268	97.156	0.479
cinA	Streptococcus pneumoniae D39	49.024	97.156	0.476
cinA	Bacillus subtilis subsp. subtilis str. 168	48.762	95.735	0.467
cinA	Streptococcus mutans UA159	45.412	100	0.457
cinA	Streptococcus suis isolate S10	44.909	90.758	0.408