Detailed information NTG0686227

Bioinformatically predicted

Overview

• Name: cinA
• Type: Machinery gene
• Locus tag: M2919_RS06165
• Genome accession: NZ_CP097017
• Coordinates: 1294459..1295712 (-)
• Length: 417 a.a.
• NCBI ID: WP_248848409.1
• Uniprot ID: -
• Organism: Vagococcus lutrae strain AT46b
• Function: facilitate localization of RecA (predicted from homology) Homologous recombination

Genomic Context

Location: 1289459..1300712

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M2919_RS06140 (M2919_06140)	-	1289605..1289805 (-)	201	WP_023605866.1	cold-shock protein	-
M2919_RS06145 (M2919_06145)	-	1289981..1290520 (-)	540	WP_222317018.1	HdeD family acid-resistance protein	-
M2919_RS06150 (M2919_06150)	-	1290543..1291406 (-)	864	WP_248848407.1	alpha/beta fold hydrolase	-
M2919_RS06155 (M2919_06155)	rny	1291558..1293117 (-)	1560	WP_248848408.1	ribonuclease Y	-
M2919_RS06160 (M2919_06160)	recA	1293336..1294373 (-)	1038	WP_023605862.1	recombinase RecA	Machinery gene
M2919_RS06165 (M2919_06165)	cinA	1294459..1295712 (-)	1254	WP_248848409.1	competence/damage-inducible protein A	Machinery gene
M2919_RS06170 (M2919_06170)	pgsA	1295852..1296430 (-)	579	WP_248848410.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
M2919_RS06175 (M2919_06175)	-	1296454..1297302 (-)	849	WP_248848411.1	helix-turn-helix domain-containing protein	-
M2919_RS06180 (M2919_06180)	ymfI	1297327..1298052 (-)	726	WP_248848412.1	elongation factor P 5-aminopentanone reductase	-
M2919_RS06185 (M2919_06185)	yfmH	1298055..1299356 (-)	1302	WP_248848413.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
M2919_RS06190 (M2919_06190)	yfmF	1299346..1300617 (-)	1272	WP_248848414.1	EF-P 5-aminopentanol modification-associated protein YfmF	-

Sequence

Protein

• Length: 417 a.a.
• Molecular weight: 45699.90 Da
• Isoelectric Point: 4.5729

>NTDB_id=686227 M2919_RS06165 WP_248848409.1 1294459..1295712(-) (cinA) [Vagococcus lutrae strain AT46b]
MRAEIIAVGTELLIGQVVNTNATFLSEELVGIGYDIYYHSVVGDNPERLKELIGQASQRSELIVLCGGLGPTEDDLTRDV
LADYLKEPMVLDPEGYDKIATYMTRSGREMTGNNRRQALTIQGGQAIPNDTGLAVGTFYQAETTSYLVLPGPPRELKPMF
YHHVIPLLKQQLPQTDQLYSRVLRFFGIGESQLVLELETLIHEQTNPTIAPYAGDTEVRLRLTVKATDETTANEMLDEME
EKIMSQVGDYFYGYGEENSLIKETVKALKAAKQTVASAESLTAGMFMSALGDVPGVSSVFNGGFVTYTNEMKSCLLKIDS
ALLAQHGAVSEACACAMAEQARVLTKSDYGVALTGVAGPDKSEGEPVGSVWIGLSSAISGTQAYHFQLQRDRQYIRQSAM
MRAMDLLRRQVIAENHD

Nucleotide

• Length: 1254 bp

>NTDB_id=686227 M2919_RS06165 WP_248848409.1 1294459..1295712(-) (cinA) [Vagococcus lutrae strain AT46b]
ATGCGAGCAGAAATTATCGCAGTGGGTACGGAGCTATTAATTGGCCAAGTGGTTAATACCAATGCGACTTTTTTATCAGA
AGAATTAGTGGGGATTGGTTACGATATTTATTATCACAGTGTGGTAGGAGATAACCCAGAGCGTTTAAAAGAGTTAATTG
GACAAGCCTCTCAGAGAAGTGAATTGATTGTGTTGTGTGGGGGATTAGGACCAACAGAAGATGATTTAACGCGAGATGTG
TTAGCTGATTATTTAAAAGAGCCGATGGTGTTAGATCCAGAGGGTTACGATAAAATTGCTACCTATATGACACGCTCTGG
TCGCGAGATGACGGGAAATAATCGTAGGCAAGCGTTAACGATTCAAGGAGGTCAAGCGATACCGAATGATACAGGCTTGG
CAGTCGGGACTTTTTATCAAGCTGAGACGACGAGTTATTTAGTCTTACCAGGACCTCCACGTGAGTTAAAACCAATGTTT
TATCATCATGTTATCCCATTGTTAAAGCAGCAGTTACCTCAAACAGACCAACTGTATTCTCGTGTATTACGCTTTTTTGG
TATCGGGGAGTCACAGTTAGTTTTAGAATTAGAAACATTAATTCACGAGCAAACCAATCCGACCATTGCGCCATATGCAG
GAGATACAGAAGTTCGTTTACGACTGACAGTCAAAGCAACAGATGAGACAACAGCAAATGAGATGCTAGATGAGATGGAA
GAAAAAATTATGTCTCAAGTAGGGGATTATTTCTATGGTTATGGGGAAGAAAATAGTTTGATTAAAGAAACCGTCAAGGC
GTTAAAAGCCGCGAAGCAAACGGTCGCTTCGGCCGAAAGTTTGACTGCCGGGATGTTTATGAGTGCATTGGGAGACGTTC
CCGGTGTTTCTAGTGTCTTTAATGGTGGCTTTGTCACATATACGAATGAGATGAAAAGTTGCTTATTAAAGATTGATTCA
GCTTTGCTTGCTCAACACGGGGCTGTTAGTGAGGCGTGTGCGTGTGCGATGGCAGAACAGGCTCGTGTGTTAACAAAGAG
TGATTATGGCGTAGCATTAACAGGCGTAGCAGGTCCAGATAAAAGTGAGGGTGAGCCTGTAGGAAGTGTGTGGATTGGCC
TTTCTTCTGCGATAAGTGGGACACAGGCTTATCATTTTCAACTTCAGCGAGACCGTCAATATATTCGGCAAAGTGCCATG
ATGCGCGCAATGGACTTATTACGTCGTCAAGTGATAGCAGAAAATCACGACTAA

Domains

Predicted by InterproScan.

• Probable molybdopterin binding domain (MoCF_biosynth) (5-169)

• Damage-inducible protein CinA KH domain (CinA_KH) (180-253)

• Competence-damaged protein (CinA) (259-410)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cinA	Streptococcus pneumoniae TIGR4	50.118	100	0.508
cinA	Streptococcus pneumoniae R6	49.645	100	0.504
cinA	Streptococcus pneumoniae Rx1	49.645	100	0.504
cinA	Streptococcus mitis NCTC 12261	49.409	100	0.501
cinA	Streptococcus mitis SK321	49.409	100	0.501
cinA	Streptococcus pneumoniae D39	49.409	100	0.501
cinA	Streptococcus mutans UA159	48.21	100	0.484
cinA	Bacillus subtilis subsp. subtilis str. 168	47.607	95.204	0.453
cinA	Streptococcus suis isolate S10	42.961	98.801	0.424