Detailed information NTG0068321

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: SNAG_RS01190
• Genome accession: NZ_AP017652
• Coordinates: 207086..207520 (+)
• Length: 144 a.a.
• NCBI ID: WP_172842371.1
• Uniprot ID: -
• Organism: Streptococcus sp. NPS 308
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 202086..212520

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SNAG_RS01165 (SNAG_0235)	nagA	203162..204313 (+)	1152	WP_096405914.1	N-acetylglucosamine-6-phosphate deacetylase	-
SNAG_RS01170 (SNAG_0236)	-	204465..204830 (+)	366	WP_096405916.1	DUF1033 family protein	-
SNAG_RS01175 (SNAG_0237)	comGA/cglA/cilD	204893..205834 (+)	942	WP_096405917.1	competence type IV pilus ATPase ComGA	Machinery gene
SNAG_RS01180 (SNAG_0238)	comGB/cglB	205782..206798 (+)	1017	WP_096405919.1	competence type IV pilus assembly protein ComGB	Machinery gene
SNAG_RS01185 (SNAG_0239)	comGC/cglC	206800..207123 (+)	324	WP_001037925.1	competence type IV pilus major pilin ComGC	Machinery gene
SNAG_RS01190 (SNAG_0240)	comGD/cglD	207086..207520 (+)	435	WP_172842371.1	competence type IV pilus minor pilin ComGD	Machinery gene
SNAG_RS01195 (SNAG_0241)	comGE/cglE	207483..207785 (+)	303	WP_172842372.1	competence type IV pilus minor pilin ComGE	Machinery gene
SNAG_RS01200 (SNAG_0242)	comGF/cglF	207748..208209 (+)	462	WP_096405922.1	competence type IV pilus minor pilin ComGF	Machinery gene
SNAG_RS01205 (SNAG_0243)	comGG/cglG	208187..208600 (+)	414	WP_096405924.1	competence type IV pilus minor pilin ComGG	Machinery gene
SNAG_RS01210 (SNAG_0244)	-	208633..209223 (+)	591	WP_172842373.1	class I SAM-dependent methyltransferase	-
SNAG_RS01215 (SNAG_0245)	comYH	209282..210235 (+)	954	WP_096405925.1	class I SAM-dependent methyltransferase	Machinery gene
SNAG_RS01220 (SNAG_0246)	-	210285..211475 (+)	1191	WP_000167798.1	acetate kinase	-
SNAG_RS01225 (SNAG_0247)	rnpA	211635..212006 (+)	372	WP_000739254.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 15924.34 Da
• Isoelectric Point: 10.6253

>NTDB_id=68321 SNAG_RS01190 WP_172842371.1 207086..207520(+) (comGD/cglD) [Streptococcus sp. NPS 308]
MQNKKQVKRLQIKAFTMFESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQT
ISNGSQKLTVPKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 435 bp

>NTDB_id=68321 SNAG_RS01190 WP_172842371.1 207086..207520(+) (comGD/cglD) [Streptococcus sp. NPS 308]
ATGCAAAACAAAAAACAAGTCAAACGGTTGCAGATTAAGGCCTTTACCATGTTTGAAAGTCTCTTGGTTTTAGGACTTGT
GAGTATCCTTGCCTTGGGCTTATCCGGCTCTGTCCAGTCCACTTTTGCGGCGGTAGAGGAGCAGATTTTCTTTATGGAGT
TTGAAGAACTCTATCGGGAAACCCAAAAACGCAGTGTAGCCAGCCAGCAAAAGACTAGTCTAAACTTGGATGGGCAGACG
ATTAGCAATGGCAGTCAAAAGTTGACCGTTCCTAAAGGAATTCAAGCACCATCGGGACAAAGTATCACATTTGACCGAGC
TGGGGGCAATTCGTCCTTGGCTAAGGTTGAATTTCAGACCAGTAAAGGAGCGATTCGCTATCAGTTATATCTAGGAAATG
GAAAAATTAAACGCATTAAGGAAACAAAAAATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus mitis NCTC 12261	95.139	100	0.951
comGD/cglD	Streptococcus pneumoniae Rx1	97.744	92.361	0.903
comGD/cglD	Streptococcus pneumoniae D39	97.744	92.361	0.903
comGD/cglD	Streptococcus pneumoniae R6	97.744	92.361	0.903
comGD/cglD	Streptococcus pneumoniae TIGR4	96.992	92.361	0.896
comGD/cglD	Streptococcus mitis SK321	96.992	92.361	0.896
comYD	Streptococcus gordonii str. Challis substr. CH1	56.391	92.361	0.521
comYD	Streptococcus mutans UA140	49.612	89.583	0.444
comYD	Streptococcus mutans UA159	49.612	89.583	0.444