Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   MZN47_RS13265 Genome accession   NZ_CP096149
Coordinates   2641875..2643119 (-) Length   414 a.a.
NCBI ID   WP_003738906.1    Uniprot ID   A0A823IQ78
Organism   Listeria monocytogenes strain FSL J1-0158     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 2636875..2648119
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MZN47_RS13240 (MZN47_13235) - 2636895..2637257 (-) 363 WP_003738909.1 YlbF family regulator -
  MZN47_RS13245 (MZN47_13240) - 2637274..2638077 (-) 804 WP_003721906.1 TIGR00282 family metallophosphoesterase -
  MZN47_RS13250 (MZN47_13245) - 2638082..2638579 (-) 498 WP_069888835.1 GNAT family N-acetyltransferase -
  MZN47_RS13255 (MZN47_13250) rny 2638693..2640255 (-) 1563 WP_003738907.1 ribonuclease Y -
  MZN47_RS13260 (MZN47_13255) recA 2640556..2641602 (-) 1047 WP_003725961.1 recombinase RecA Machinery gene
  MZN47_RS13265 (MZN47_13260) cinA 2641875..2643119 (-) 1245 WP_003738906.1 competence/damage-inducible protein A Machinery gene
  MZN47_RS13270 (MZN47_13265) pgsA 2643185..2643763 (-) 579 WP_003723921.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  MZN47_RS13275 (MZN47_13270) - 2643854..2644783 (-) 930 WP_070034149.1 RodZ family helix-turn-helix domain-containing protein -
  MZN47_RS13280 (MZN47_13275) - 2644834..2645565 (-) 732 WP_003738904.1 SDR family oxidoreductase -
  MZN47_RS13285 (MZN47_13280) - 2645658..2646944 (-) 1287 WP_070034115.1 pitrilysin family protein -

Sequence

Protein


Download         Length: 414 a.a.        Molecular weight: 45650.86 Da        Isoelectric Point: 4.7052

>NTDB_id=679776 MZN47_RS13265 WP_003738906.1 2641875..2643119(-) (cinA) [Listeria monocytogenes strain FSL J1-0158]
MASAEIIAVGTELLLGQIVNANAAFISQELAADGIYVYHHTVVGDNPMRLKEVIEIAENRSDILIFTGGLGPTEDDITKQ
ILANHLDKQLVEDEYHMNKINEYFTSRNRTMTENNKLQAVIIEGSTVLNNDYGFAAGMYLKENNHTYVLLPGPPSEMKPM
FTNYANPLLLSESGEQNILESKIMRFFGIGESQLATDLNDLIVTQVNPTIATYAGDNEVVVRITATAKTKEEASRLVKDT
EEEVLRRDGSFLYGYGEVSLPELVTAMLLEKELTISAAESFTAGLFQAEIARFPGISKIFKGGMVTYSEEIKQSILQVSP
QVIKEKGVVSAECAKEMAENVSRLCKTDIGISFTGVAGPDSLEGHPAGTIWIGLSVKGHEAEAFQFVYGRDRNHNRRRAV
KQGFQLIKQFLDAN

Nucleotide


Download         Length: 1245 bp        

>NTDB_id=679776 MZN47_RS13265 WP_003738906.1 2641875..2643119(-) (cinA) [Listeria monocytogenes strain FSL J1-0158]
ATGGCAAGTGCAGAAATCATTGCAGTAGGAACAGAACTATTACTTGGACAAATTGTTAATGCTAATGCTGCGTTTATTTC
TCAAGAATTAGCTGCAGACGGAATATATGTATATCATCACACGGTGGTTGGAGATAATCCAATGCGTTTAAAAGAAGTAA
TCGAAATTGCTGAAAACCGAAGTGACATTTTAATCTTTACCGGCGGACTTGGACCGACTGAGGATGATATTACGAAACAA
ATCTTGGCTAATCATCTAGACAAACAATTAGTGGAAGATGAGTACCATATGAATAAAATTAATGAGTATTTTACTTCTAG
GAACAGAACTATGACCGAAAATAATAAATTACAAGCAGTTATTATTGAAGGTTCTACCGTATTGAATAATGATTATGGCT
TTGCGGCTGGAATGTACTTAAAAGAAAATAATCATACCTACGTTTTGTTACCAGGCCCACCATCTGAAATGAAACCAATG
TTTACAAATTATGCTAACCCCTTACTTTTAAGTGAAAGTGGCGAGCAAAACATTTTAGAATCAAAAATTATGCGTTTTTT
TGGTATTGGAGAGTCACAATTAGCTACTGATTTAAACGATTTGATTGTCACGCAAGTCAACCCGACGATTGCGACATATG
CTGGTGATAATGAAGTCGTGGTTCGTATTACAGCGACAGCTAAAACAAAAGAAGAAGCAAGCAGGCTGGTGAAGGATACC
GAGGAGGAAGTATTGCGCCGAGATGGTAGCTTTTTATATGGATATGGAGAAGTTTCATTACCTGAATTAGTTACGGCGAT
GTTGCTTGAAAAAGAGCTAACCATCTCTGCTGCAGAAAGTTTCACTGCTGGTTTGTTCCAAGCAGAAATTGCTCGCTTTC
CTGGTATTTCGAAAATATTTAAAGGCGGTATGGTGACATACAGTGAAGAAATAAAACAATCCATATTACAAGTATCTCCC
CAAGTAATAAAAGAAAAAGGCGTTGTTAGTGCGGAATGTGCGAAGGAAATGGCTGAAAATGTAAGCCGCCTTTGTAAGAC
GGATATTGGAATCAGTTTTACAGGTGTTGCAGGCCCTGATAGTTTAGAAGGTCATCCTGCTGGTACTATTTGGATTGGAC
TGAGCGTTAAAGGTCATGAAGCAGAAGCTTTTCAGTTTGTTTATGGAAGAGATCGAAACCATAATCGCCGTCGTGCAGTA
AAACAAGGATTTCAGTTAATTAAACAATTTTTAGACGCGAATTAG

Domains

Predicted by InterproScan.

Probable molybdopterin binding domain (MoCF_biosynth)

(6-169)

Damage-inducible protein CinA KH domain (CinA_KH)

(181-254)

Competence-damaged protein (CinA)

(259-410)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A823IQ78

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

51.345

98.792

0.507
  cinA Streptococcus pneumoniae TIGR4

49.048

100

0.498
  cinA Streptococcus mitis SK321

49.043

100

0.495
  cinA Streptococcus mutans UA159

49.272

99.517

0.49
  cinA Streptococcus pneumoniae Rx1

48.333

100

0.49
  cinA Streptococcus pneumoniae R6

48.333

100

0.49
  cinA Streptococcus pneumoniae D39

48.095

100

0.488
  cinA Streptococcus mitis NCTC 12261

48.325

100

0.488
  cinA Streptococcus suis isolate S10

39.078

99.517

0.389