Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   M0D46_RS14225 Genome accession   NZ_CP096143
Coordinates   3286803..3287204 (+) Length   133 a.a.
NCBI ID   WP_005913706.1    Uniprot ID   A0AAI7ZH35
Organism   Xanthomonas prunicola strain CIX97     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3281803..3292204
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M0D46_RS14205 (M0D46_14190) tsaB 3283032..3283757 (+) 726 WP_260813745.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  M0D46_RS14210 (M0D46_14195) - 3283754..3284668 (+) 915 WP_260813746.1 ADP-ribosylglycohydrolase family protein -
  M0D46_RS14215 (M0D46_14200) - 3284744..3285619 (-) 876 WP_101361769.1 energy transducer TonB -
  M0D46_RS14220 (M0D46_14205) gshB 3285616..3286566 (-) 951 WP_252162364.1 glutathione synthase -
  M0D46_RS14225 (M0D46_14210) pilG 3286803..3287204 (+) 402 WP_005913706.1 twitching motility response regulator PilG Regulator
  M0D46_RS14230 (M0D46_14215) - 3287222..3287584 (+) 363 WP_005913708.1 response regulator -
  M0D46_RS14235 (M0D46_14220) - 3287584..3288114 (+) 531 WP_003482487.1 chemotaxis protein CheW -
  M0D46_RS14240 (M0D46_14225) - 3288154..3290190 (+) 2037 WP_252162365.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14667.03 Da        Isoelectric Point: 6.9539

>NTDB_id=679691 M0D46_RS14225 WP_005913706.1 3286803..3287204(+) (pilG) [Xanthomonas prunicola strain CIX97]
MSENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=679691 M0D46_RS14225 WP_005913706.1 3286803..3287204(+) (pilG) [Xanthomonas prunicola strain CIX97]
ATGAGTGAAAACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTCATCGATGATTCGAAGACCATTCGCCG
CACCGCCGAAACGCTGCTGAAGCGAGAAGGTTGTGAAGTAGTGACAGCAACGGATGGTTTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAGATCATTTTTGTCGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAATCGACGCCGGTGATCATGTTGTCGTCCAAGGATGGCCTGTTCGACAAGGCCCGCGGCCGCAT
CGTCGGTTCCGAGCAATATCTGACCAAGCCGTTCACCCGTGAAGAACTACTGAGCGCGATCCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684