Detailed information NTG0679555

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: MZO21_RS01125
• Genome accession: NZ_CP096120
• Coordinates: 234675..235733 (+)
• Length: 352 a.a.
• NCBI ID: WP_248101189.1
• Uniprot ID: -
• Organism: Acinetobacter portensis strain JNE5
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 229675..240733

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MZO21_RS01110 (MZO21_01105)	mraY	229958..231076 (+)	1119	WP_248101183.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-
MZO21_RS01115 (MZO21_01110)	-	231141..231944 (+)	804	WP_248101185.1	putative RNA methyltransferase	-
MZO21_RS01120 (MZO21_01115)	ponA	231992..234508 (-)	2517	WP_248101187.1	PBP1A family penicillin-binding protein	-
MZO21_RS01125 (MZO21_01120)	comM	234675..235733 (+)	1059	WP_248101189.1	pilus assembly protein PilM	Machinery gene
MZO21_RS01130 (MZO21_01125)	pilN	235733..236392 (+)	660	WP_248101191.1	PilN domain-containing protein	Machinery gene
MZO21_RS01135 (MZO21_01130)	comO	236389..237072 (+)	684	WP_248101193.1	type 4a pilus biogenesis protein PilO	Machinery gene
MZO21_RS01140 (MZO21_01135)	pilP	237072..237599 (+)	528	WP_248101195.1	pilus assembly protein PilP	Machinery gene
MZO21_RS01145 (MZO21_01140)	pilQ	237615..239723 (+)	2109	WP_248101197.1	type IV pilus secretin PilQ	Machinery gene
MZO21_RS01150 (MZO21_01145)	-	239812..240303 (+)	492	WP_248101199.1	shikimate kinase	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 38898.45 Da
• Isoelectric Point: 4.4486

>NTDB_id=679555 MZO21_RS01125 WP_248101189.1 234675..235733(+) (comM) [Acinetobacter portensis strain JNE5]
MRSLYSKQSKGLIGVDISSTSVKLLELSVKNGRYWVENYALVPLPEGSVVEKNILNPEAVGDAIEKALSLSNIRTDNAAL
AIPTSMVITKVIEMDADMTSDEREVQIRMDAEQYIPFPLDEVSLDFEVLPDRLSNSNRVNVLLVATRVENVEMRCEAIEL
GGLTPKIADVENFAIENAFKVFADTLPMGANTIGILDIGHTMTTLSVLQDNKIIYNREQVFGGKQLTQEIQNRYGLSYEE
AGRAKKTRTLPDDYDAEVLEPFLDAVIQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKVLQQKLGYRVTTANPFL
QMGFSPQIDIKKIESDAPSLLVACGLAMRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=679555 MZO21_RS01125 WP_248101189.1 234675..235733(+) (comM) [Acinetobacter portensis strain JNE5]
GTGCGCAGTCTATATAGTAAACAGAGTAAGGGGTTAATAGGTGTAGATATTAGTTCTACTTCTGTTAAATTGTTGGAGCT
TTCTGTAAAAAATGGTCGGTATTGGGTGGAAAATTACGCCTTAGTTCCGTTACCAGAGGGAAGTGTTGTTGAAAAAAACA
TTCTCAACCCTGAAGCGGTTGGCGATGCGATTGAAAAAGCACTAAGCCTTTCTAATATTCGTACTGATAATGCTGCTCTA
GCAATTCCTACATCTATGGTAATCACTAAAGTGATTGAAATGGATGCTGATATGACGAGTGATGAACGTGAAGTTCAAAT
TCGTATGGATGCTGAGCAATATATTCCATTCCCATTAGATGAAGTAAGTTTGGACTTCGAAGTTCTACCAGATCGCTTAT
CTAATTCAAATCGTGTCAATGTATTACTTGTGGCAACACGTGTTGAAAATGTCGAGATGCGCTGTGAAGCAATCGAGCTA
GGTGGTTTAACACCTAAAATTGCAGACGTTGAAAACTTTGCTATTGAAAATGCATTTAAAGTTTTTGCTGATACTTTGCC
AATGGGCGCAAATACAATTGGTATTTTAGATATTGGTCATACCATGACGACCCTATCTGTACTTCAAGACAATAAAATTA
TTTATAACCGCGAACAAGTATTCGGTGGTAAGCAATTAACGCAAGAAATTCAAAATCGTTATGGCTTATCTTATGAAGAG
GCGGGTCGAGCTAAAAAGACGCGTACTTTACCCGATGATTATGATGCAGAAGTTTTAGAGCCATTCTTAGATGCTGTTAT
TCAACAGGCTGCTCGCTCATTACAATTTTTCTTTTCATCTTCTCAATTCAATGAGATTGATCATATTTTGTTGGCGGGTG
GAAATGCAAATATCCCAGGTCTTGCTAAGGTTTTACAACAAAAACTTGGCTACCGTGTGACAACAGCAAATCCATTTTTA
CAAATGGGTTTCTCTCCTCAAATTGATATTAAAAAAATTGAAAGTGATGCGCCATCTTTATTAGTCGCATGCGGATTAGC
AATGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	80.966	100	0.81
pilM	Acinetobacter baumannii D1279779	80.398	100	0.804
comM	Acinetobacter baylyi ADP1	74.432	100	0.744
pilM	Legionella pneumophila strain ERS1305867	40.96	100	0.412