Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Machinery gene
Locus tag   MZN68_RS07915 Genome accession   NZ_CP096117
Coordinates   1577911..1579143 (+) Length   410 a.a.
NCBI ID   WP_076612607.1    Uniprot ID   -
Organism   Neisseria meningitidis strain DFS-1910310016     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1572911..1584143
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MZN68_RS07895 (MZN68_07800) fabI 1573787..1574572 (-) 786 WP_002212340.1 enoyl-ACP reductase FabI -
  MZN68_RS07900 (MZN68_07805) dapD 1574727..1575548 (-) 822 WP_002220281.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase -
  MZN68_RS07905 (MZN68_07810) - 1575558..1575788 (-) 231 WP_025458514.1 hypothetical protein -
  MZN68_RS07910 (MZN68_07815) pgi 1575758..1577401 (-) 1644 WP_002220279.1 glucose-6-phosphate isomerase -
  MZN68_RS07915 (MZN68_07820) pilG 1577911..1579143 (+) 1233 WP_076612607.1 type 4 pilus assembly protein PilG Machinery gene
  MZN68_RS07920 (MZN68_07825) pilD 1579218..1580078 (+) 861 WP_076612606.1 A24 family peptidase Machinery gene
  MZN68_RS07925 (MZN68_07830) coaE 1580080..1580712 (+) 633 WP_374186252.1 dephospho-CoA kinase -
  MZN68_RS07930 (MZN68_07835) - 1580705..1580914 (+) 210 WP_003696096.1 DNA gyrase inhibitor YacG -
  MZN68_RS07935 (MZN68_07840) pilF 1581000..1582676 (-) 1677 WP_003689817.1 type IV-A pilus assembly ATPase PilB Machinery gene
  MZN68_RS07945 (MZN68_07850) - 1583014..1583460 (-) 447 WP_003689818.1 DUF441 domain-containing protein -

Sequence

Protein


Download         Length: 410 a.a.        Molecular weight: 45241.25 Da        Isoelectric Point: 9.9273

>NTDB_id=679513 MZN68_RS07915 WP_076612607.1 1577911..1579143(+) (pilG) [Neisseria meningitidis strain DFS-1910310016]
MAKNGGLSLFSKKEKRFIFEGRHSASDKLVNGEVSAFTEEEARKKLAKRGIRPLQITRVKTSSKRKITQEDITVFTRQLS
TMIKAGLPLMQAFEIVARGHGNPSMTEMLMEIRGEVEQGSSLSRAFSNHPKYFDRFYCNLVAAGETGGVLESLLDKLAIY
KEKTQAIRKKVKTALTYPVSVIAVAIGLVFVMMIFVLPAFKEVYANMGAELPALTQTVMDMSDFFVSYGWMVLIALGFAI
YGFLKLKARSIKIQRRMDAILLRMPIFGDIVRKGTIARWGRTTATLIAAGVPLVDVLDSTAGAAGNLIYEEATREIRTRV
IQGLSMTSGMRATELFPNMMLQMSSIGEESGSLDDMLNKAAEFYEDEVDNAVGRLSAMMEPIIIVILGLVIGTLLVAMYL
PLFNLGNVVG

Nucleotide


Download         Length: 1233 bp        

>NTDB_id=679513 MZN68_RS07915 WP_076612607.1 1577911..1579143(+) (pilG) [Neisseria meningitidis strain DFS-1910310016]
ATGGCTAAAAACGGAGGACTTTCTTTATTTTCAAAGAAAGAAAAACGCTTTATCTTTGAAGGCAGGCATTCCGCCTCCGA
CAAACTGGTCAACGGCGAAGTATCCGCGTTTACCGAAGAAGAGGCGCGCAAAAAACTGGCAAAACGCGGCATCCGCCCGT
TGCAGATTACCCGTGTGAAAACAAGCTCCAAGCGCAAAATCACACAAGAAGACATCACCGTTTTCACCCGCCAGCTGTCC
ACGATGATTAAAGCGGGCCTGCCGCTGATGCAGGCATTTGAAATCGTGGCGCGCGGACACGGCAACCCGTCTATGACGGA
AATGCTGATGGAAATCCGAGGCGAAGTGGAACAGGGCAGCTCGTTGAGCCGCGCATTCTCAAATCACCCGAAATATTTCG
ACCGCTTCTACTGCAACCTGGTTGCGGCGGGCGAAACGGGCGGCGTATTGGAAAGCCTGCTGGACAAATTGGCAATTTAC
AAAGAAAAAACCCAGGCCATCCGCAAAAAGGTAAAAACCGCGCTGACCTATCCGGTATCCGTCATCGCCGTCGCCATCGG
TTTGGTATTCGTGATGATGATTTTCGTACTGCCCGCCTTTAAAGAAGTTTACGCCAATATGGGCGCGGAGCTTCCCGCAC
TGACCCAAACAGTGATGGATATGTCCGACTTTTTCGTCTCATACGGCTGGATGGTGCTGATCGCACTGGGCTTTGCCATA
TACGGCTTCCTTAAATTGAAGGCGCGTTCGATTAAAATCCAACGGCGTATGGATGCCATACTGCTGCGTATGCCGATTTT
CGGAGACATTGTCCGCAAAGGGACGATTGCCCGCTGGGGCAGGACGACGGCGACGCTGATTGCGGCAGGCGTGCCTTTGG
TCGATGTATTGGACTCCACTGCCGGCGCGGCGGGCAATTTAATCTATGAAGAAGCCACCCGGGAAATCCGTACGCGCGTC
ATCCAAGGTTTGTCTATGACTTCGGGGATGCGTGCGACGGAACTGTTCCCCAATATGATGTTGCAGATGTCTTCCATCGG
CGAGGAATCGGGTTCTTTGGACGATATGCTCAACAAAGCCGCCGAATTTTACGAAGACGAGGTGGACAATGCGGTCGGCA
GGCTGTCCGCTATGATGGAGCCGATCATTATCGTGATTTTAGGCTTGGTCATCGGTACGCTTCTGGTCGCCATGTATCTG
CCGCTGTTTAATTTGGGTAACGTGGTCGGCTGA

Domains

Predicted by InterproScan.

Type II secretion system (T2SS), protein F (T2SSF)

(75-198)

Type II secretion system (T2SS), protein F (T2SSF)

(281-401)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Neisseria gonorrhoeae MS11

98.778

99.756

0.985
  pilG Neisseria meningitidis 44/76-A

97.805

100

0.978
  pilC Acinetobacter baumannii D1279779

47.487

97.073

0.461
  pilC Acinetobacter baylyi ADP1

45.614

97.317

0.444
  pilC Pseudomonas stutzeri DSM 10701

44.888

97.805

0.439
  pilC Legionella pneumophila strain ERS1305867

44.836

96.829

0.434
  pilC Vibrio cholerae strain A1552

41.191

98.293

0.405
  pilC Vibrio campbellii strain DS40M4

39.454

98.293

0.388