Detailed information NTG0679514

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: MZN68_RS07920
• Genome accession: NZ_CP096117
• Coordinates: 1579218..1580078 (+)
• Length: 286 a.a.
• NCBI ID: WP_076612606.1
• Uniprot ID: -
• Organism: Neisseria meningitidis strain DFS-1910310016
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1574218..1585078

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MZN68_RS07900 (MZN68_07805)	dapD	1574727..1575548 (-)	822	WP_002220281.1	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	-
MZN68_RS07905 (MZN68_07810)	-	1575558..1575788 (-)	231	WP_025458514.1	hypothetical protein	-
MZN68_RS07910 (MZN68_07815)	pgi	1575758..1577401 (-)	1644	WP_002220279.1	glucose-6-phosphate isomerase	-
MZN68_RS07915 (MZN68_07820)	pilG	1577911..1579143 (+)	1233	WP_076612607.1	type 4 pilus assembly protein PilG	Machinery gene
MZN68_RS07920 (MZN68_07825)	pilD	1579218..1580078 (+)	861	WP_076612606.1	A24 family peptidase	Machinery gene
MZN68_RS07925 (MZN68_07830)	coaE	1580080..1580712 (+)	633	WP_374186252.1	dephospho-CoA kinase	-
MZN68_RS07930 (MZN68_07835)	-	1580705..1580914 (+)	210	WP_003696096.1	DNA gyrase inhibitor YacG	-
MZN68_RS07935 (MZN68_07840)	pilF	1581000..1582676 (-)	1677	WP_003689817.1	type IV-A pilus assembly ATPase PilB	Machinery gene
MZN68_RS07945 (MZN68_07850)	-	1583014..1583460 (-)	447	WP_003689818.1	DUF441 domain-containing protein	-
MZN68_RS07950 (MZN68_07855)	-	1583464..1584438 (-)	975	WP_003689819.1	polyprenyl synthetase family protein	-
MZN68_RS07955 (MZN68_07860)	rplU	1584662..1584970 (+)	309	WP_003691838.1	50S ribosomal protein L21	-

Sequence

Protein

• Length: 286 a.a.
• Molecular weight: 31239.16 Da
• Isoelectric Point: 8.4770

>NTDB_id=679514 MZN68_RS07920 WP_076612606.1 1579218..1580078(+) (pilD) [Neisseria meningitidis strain DFS-1910310016]
MSDLSVLSPFAVPLAAVFGLLVGSFLNVVIYRVPVMMERGWTVFAKEHLNLPLTDEESRTFNLMKPDSCCPKCRVPIRAW
QNIPIVSYLLLRGKCASCQTKISIRYPSIELLTGVLFGLVAWQYGWSWITLGGLVLTAFLISLTFIDADTQYLPDSMTLP
LIWLGLIFNLDGGFVPLQSAVLGAVAGYGSLWLLCAVYKLLTGKTGMGNGDFKLIAALGAWLGISALPVLIFVSSLIGLV
AAIVMRVAKGQHFAFGPALTVSGWIIFTANDSVWRAVNWWLTHPVL

Nucleotide

• Length: 861 bp

>NTDB_id=679514 MZN68_RS07920 WP_076612606.1 1579218..1580078(+) (pilD) [Neisseria meningitidis strain DFS-1910310016]
ATGTCTGATTTGTCTGTATTGTCGCCGTTTGCCGTGCCTTTGGCAGCAGTTTTCGGTTTATTGGTCGGAAGTTTCTTAAA
CGTCGTCATTTACCGCGTGCCGGTCATGATGGAACGCGGCTGGACGGTATTTGCCAAAGAACATTTAAACCTGCCGCTGA
CCGACGAGGAAAGCCGTACCTTCAACCTGATGAAGCCGGATTCCTGCTGTCCAAAATGCCGTGTGCCGATACGCGCGTGG
CAGAACATCCCGATTGTCAGCTACCTGCTCCTGCGCGGCAAATGCGCCTCCTGCCAAACCAAAATCAGCATACGCTACCC
CTCTATCGAGCTGCTGACCGGCGTATTGTTCGGGCTGGTCGCCTGGCAATACGGCTGGTCTTGGATTACGCTGGGCGGAT
TGGTACTGACCGCGTTTCTGATTTCCCTGACCTTTATCGATGCGGACACCCAATACCTGCCCGACTCGATGACACTGCCC
TTGATTTGGCTGGGGCTGATATTTAATTTGGACGGCGGCTTCGTGCCTTTGCAGTCTGCCGTTTTAGGTGCGGTCGCCGG
CTATGGTTCATTATGGCTCTTATGTGCAGTGTATAAACTGCTCACAGGAAAAACCGGTATGGGCAACGGAGATTTCAAAC
TGATTGCCGCATTGGGCGCGTGGCTCGGCATATCCGCATTGCCCGTGCTGATTTTTGTTTCCTCGCTGATCGGTTTGGTC
GCGGCAATCGTTATGCGCGTCGCCAAGGGGCAGCATTTTGCCTTCGGCCCCGCACTGACAGTTTCGGGCTGGATAATTTT
TACGGCAAACGATTCCGTATGGCGGGCGGTCAACTGGTGGCTGACCCATCCGGTGCTGTAA

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (17-124)

• Type IV leader peptidase family (Peptidase_A24) (134-242)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Neisseria gonorrhoeae MS11	97.895	99.65	0.976
pilD	Vibrio cholerae strain A1552	45.486	100	0.458
pilD	Acinetobacter baumannii D1279779	48.485	92.308	0.448
pilD	Acinetobacter nosocomialis M2	48.485	92.308	0.448
pilD	Vibrio campbellii strain DS40M4	45.652	96.503	0.441