Detailed information NTG0679083

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: OG465_RS19820
• Genome accession: NZ_CP109580
• Coordinates: 4181371..4182396 (-)
• Length: 341 a.a.
• NCBI ID: WP_328790333.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01367
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4176371..4187396

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG465_RS19785 (OG465_19745)	-	4176380..4176760 (+)	381	WP_328790335.1	helix-turn-helix domain-containing protein	-
OG465_RS19790 (OG465_19750)	-	4176834..4177403 (-)	570	WP_405787320.1	GPR1/FUN34/YaaH family transporter	-
OG465_RS19795 (OG465_19755)	-	4177560..4178093 (-)	534	WP_266596220.1	universal stress protein	-
OG465_RS19800 (OG465_19760)	-	4178416..4178859 (+)	444	WP_405787321.1	hypothetical protein	-
OG465_RS19805 (OG465_19765)	-	4179236..4180411 (+)	1176	WP_150257537.1	helix-turn-helix domain-containing protein	-
OG465_RS19810 (OG465_19770)	orn	4180517..4181119 (+)	603	WP_030008729.1	oligoribonuclease	-
OG465_RS19820 (OG465_19780)	cytR	4181371..4182396 (-)	1026	WP_328790333.1	LacI family DNA-binding transcriptional regulator	Regulator
OG465_RS19825 (OG465_19785)	-	4182499..4183854 (+)	1356	WP_328790332.1	extracellular solute-binding protein	-
OG465_RS19830 (OG465_19790)	-	4183862..4184857 (+)	996	WP_328790331.1	sugar ABC transporter permease	-
OG465_RS19835 (OG465_19795)	-	4184854..4185678 (+)	825	WP_328790330.1	carbohydrate ABC transporter permease	-
OG465_RS19840 (OG465_19800)	-	4185675..4187129 (+)	1455	WP_328790329.1	GH1 family beta-glucosidase	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 36192.14 Da
• Isoelectric Point: 7.1361

>NTDB_id=679083 OG465_RS19820 WP_328790333.1 4181371..4182396(-) (cytR) [Streptomyces sp. NBC_01367]
MNGHGRSGGRPTLEEVAARAGVGRGTVSRVINGSSKVSEHTRVAVEAAVAELGYVPNRAARALAANRTDAIALVIPEPEA
RFFAEPYFSEVVRGVGAELADTEVQLVLTLAGSDRERRRLAQYLSGHRVDGVLLVSVHAGDPLPELLAELGIPTVISGRR
SAAETLPSVDSDNLAGAAEAVSHLLDRGRRAIATITGPLDVYGAQCRLDGYRKALAAAGRPVDERMIAVGDFTEEGGRRA
MRALLERHPGLDAVFAASDVMAAGARRELRAAGRRIPRDVALVGFDDSVVARHMDPPLTSVRQPIEEMGRTMTRMLLDRI
AGEGGEAAAVLPNRLVVRESS

Nucleotide

• Length: 1026 bp

>NTDB_id=679083 OG465_RS19820 WP_328790333.1 4181371..4182396(-) (cytR) [Streptomyces sp. NBC_01367]
ATGAACGGGCACGGGCGCAGTGGGGGACGACCGACCCTGGAGGAGGTCGCGGCGCGCGCCGGAGTCGGGCGCGGCACGGT
CTCCCGGGTGATCAACGGATCCTCCAAGGTCAGCGAGCACACCAGGGTCGCCGTCGAGGCGGCCGTGGCCGAGCTGGGGT
ACGTACCGAACCGTGCCGCGCGCGCCCTCGCGGCCAACCGCACCGACGCCATAGCCCTCGTGATCCCCGAGCCCGAGGCC
CGCTTCTTCGCCGAGCCCTACTTCTCCGAAGTGGTCCGCGGTGTCGGCGCCGAGCTCGCCGACACCGAGGTCCAGCTCGT
CCTCACCCTGGCGGGCAGCGACCGCGAGCGCCGCCGGCTCGCGCAGTACCTGTCCGGGCACCGCGTCGACGGGGTGCTGC
TCGTCTCCGTCCACGCCGGGGACCCGCTGCCGGAGCTGCTGGCCGAACTCGGCATCCCGACGGTGATCAGCGGCCGCCGC
TCGGCCGCCGAGACCCTGCCCAGCGTGGACTCCGACAACCTGGCGGGCGCGGCCGAGGCCGTGAGCCACCTCCTCGACCG
GGGCCGCCGCGCGATCGCCACGATCACCGGCCCGCTGGACGTGTACGGGGCCCAGTGCCGCCTCGACGGTTACCGGAAGG
CCCTGGCCGCCGCCGGACGCCCCGTCGACGAGCGGATGATCGCGGTCGGTGACTTCACCGAGGAGGGCGGCCGGCGGGCC
ATGCGCGCACTGCTGGAGCGCCACCCCGGGCTCGACGCGGTCTTCGCCGCCTCGGACGTGATGGCGGCGGGCGCCCGGCG
GGAGCTGCGCGCGGCCGGCCGGCGGATCCCGCGGGACGTGGCGCTGGTCGGCTTCGACGACTCGGTGGTGGCCCGGCACA
TGGACCCGCCGCTGACCAGCGTCCGGCAGCCGATCGAGGAGATGGGCCGGACCATGACGCGGATGCTGCTGGACCGGATC
GCGGGGGAGGGGGGCGAGGCGGCCGCCGTGCTGCCGAACCGGCTGGTGGTCCGGGAGTCGTCCTGA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (181-341)

• Bacterial regulatory proteins, lacI family (LacI) (12-57)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	37.87	99.12	0.375
cytR	Vibrio parahaemolyticus RIMD 2210633	36.686	99.12	0.364