Detailed information NTG0678937

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: MYA84_RS01415
• Genome accession: NZ_CP095872
• Coordinates: 301500..302558 (+)
• Length: 352 a.a.
• NCBI ID: WP_004810013.1
• Uniprot ID: A0A1P8PN45
• Organism: Acinetobacter schindleri strain H4-3-C1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 296500..307558

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MYA84_RS01400 (MYA84_01400)	mraY	296749..297867 (+)	1119	WP_048881757.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-
MYA84_RS01405 (MYA84_01405)	-	297926..298729 (+)	804	WP_048881758.1	putative RNA methyltransferase	-
MYA84_RS01410 (MYA84_01410)	ponA	298802..301330 (-)	2529	WP_184103406.1	penicillin-binding protein PBP1a	-
MYA84_RS01415 (MYA84_01415)	pilM	301500..302558 (+)	1059	WP_004810013.1	pilus assembly protein PilM	Machinery gene
MYA84_RS01420 (MYA84_01420)	comN	302558..303199 (+)	642	WP_048881760.1	PilN domain-containing protein	Machinery gene
MYA84_RS01425 (MYA84_01425)	comO	303193..303912 (+)	720	WP_026056744.1	type 4a pilus biogenesis protein PilO	Machinery gene
MYA84_RS01430 (MYA84_01430)	pilP	303912..304439 (+)	528	WP_004810006.1	pilus assembly protein PilP	Machinery gene
MYA84_RS01435 (MYA84_01435)	pilQ	304456..306621 (+)	2166	WP_184103409.1	type IV pilus secretin PilQ family protein	Machinery gene
MYA84_RS01440 (MYA84_01440)	aroK	306658..307194 (+)	537	WP_071319795.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 38961.55 Da
• Isoelectric Point: 4.6864

>NTDB_id=678937 MYA84_RS01415 WP_004810013.1 301500..302558(+) (pilM) [Acinetobacter schindleri strain H4-3-C1]
MRRLYRKPNKGLIGVDISSTSVKVLELSMKSGRYWVESYALVPLPEGSVVEKNILNPEAVGDALARAINLANTQSNQAAF
AIPTSMAITKTIEMDADMTSDEREVQIREDAEQYIPFPLDEASIDFEVLPDRLSNPNRVNVLLVATRIENVEARSEVLQI
AGITPKIADVESFALENAFRVFADTLPMGVNTVGILDIGHSMTTLSVMRNNKIIYTREQVFGGKQLTQEIQNRYGLSFEE
AGRAKKTRALPDDYDIEVLEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQIDIKKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=678937 MYA84_RS01415 WP_004810013.1 301500..302558(+) (pilM) [Acinetobacter schindleri strain H4-3-C1]
GTGCGCAGGTTATATCGTAAGCCAAACAAGGGGTTAATAGGCGTCGACATCAGCTCGACTTCTGTTAAAGTTTTGGAACT
CTCTATGAAAAGCGGACGGTACTGGGTAGAAAGCTATGCTTTGGTCCCATTACCAGAAGGTAGTGTTGTTGAAAAAAACA
TCTTAAATCCAGAAGCCGTCGGTGATGCTTTGGCTCGTGCTATTAACTTGGCCAATACCCAATCTAACCAGGCTGCATTT
GCGATTCCTACGTCTATGGCGATCACCAAAACGATCGAAATGGATGCAGATATGACAAGTGATGAACGCGAAGTTCAAAT
TCGTGAAGATGCCGAACAATACATTCCATTCCCACTCGATGAAGCCAGCATTGACTTTGAAGTCTTGCCTGATCGATTGT
CTAATCCAAATCGTGTCAATGTTCTGTTGGTCGCAACCCGTATTGAAAATGTCGAAGCCCGGTCTGAAGTACTGCAAATC
GCGGGGATCACACCCAAGATTGCAGATGTAGAAAGCTTTGCATTGGAAAATGCTTTCAGGGTGTTTGCCGATACTTTACC
AATGGGCGTAAATACTGTCGGTATTCTGGATATTGGTCATAGCATGACAACTCTATCAGTCATGCGGAACAACAAGATTA
TTTATACTCGTGAGCAGGTGTTTGGGGGCAAGCAGCTGACTCAGGAAATCCAGAATCGTTATGGTCTGTCTTTTGAAGAA
GCGGGACGCGCCAAGAAAACACGTGCATTGCCAGATGACTATGATATTGAAGTCTTGGAGCCATTCTTGGATGCTGTGGT
GCAACAGGCAGCTCGTTCATTGCAGTTTTTCTTCTCATCTTCTCAGTTTAATGAAATTGACCATATCCTGTTGGCAGGAG
GGAATGCCAATATTCCGGGTCTGGCAAAATTATTACAGCAAAAGCTTGGTTACCGTGTCACGATCGCGAATCCATTTTTA
CAAATGGGCTTTTCTCCTCAAATTGATATTAAAAAAATTGAAAATGACGCGTCCTCACTCATGGTTGCATGTGGTTTGGC
ATTGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: A0A1P8PN45

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	83.807	100	0.838
comM	Acinetobacter nosocomialis M2	83.807	100	0.838
comM	Acinetobacter baylyi ADP1	78.125	100	0.781
pilM	Legionella pneumophila strain ERS1305867	39.266	100	0.395