Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilE   Type   Machinery gene
Locus tag   MTZ49_RS04785 Genome accession   NZ_CP094972
Coordinates   1005095..1005583 (+) Length   162 a.a.
NCBI ID   WP_319804744.1    Uniprot ID   -
Organism   Entomomonas sp. E2T0     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1000095..1010583
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MTZ49_RS04750 (MTZ49_04745) - 1000429..1000908 (+) 480 WP_264747244.1 hypothetical protein -
  MTZ49_RS04755 (MTZ49_04750) - 1000901..1001320 (+) 420 WP_264747245.1 hypothetical protein -
  MTZ49_RS04760 (MTZ49_04755) - 1001379..1001846 (+) 468 WP_264747246.1 hypothetical protein -
  MTZ49_RS04765 (MTZ49_04760) dbpA 1002443..1003810 (-) 1368 WP_264747247.1 ATP-dependent RNA helicase DbpA -
  MTZ49_RS04775 (MTZ49_04770) - 1004053..1004268 (+) 216 WP_264747248.1 hypothetical protein -
  MTZ49_RS04785 (MTZ49_04780) pilE 1005095..1005583 (+) 489 WP_319804744.1 pilin Machinery gene
  MTZ49_RS04795 (MTZ49_04790) - 1005719..1006201 (+) 483 WP_319804745.1 pilin -
  MTZ49_RS04800 (MTZ49_04795) - 1006228..1006503 (-) 276 WP_264747249.1 DUF2218 domain-containing protein -
  MTZ49_RS04805 (MTZ49_04800) serA 1006597..1007826 (-) 1230 WP_264747250.1 phosphoglycerate dehydrogenase -
  MTZ49_RS04810 (MTZ49_04805) - 1008006..1009397 (+) 1392 WP_264747251.1 FAD-binding oxidoreductase -

Sequence

Protein


Download         Length: 162 a.a.        Molecular weight: 16666.11 Da        Isoelectric Point: 8.0938

>NTDB_id=674620 MTZ49_RS04785 WP_319804744.1 1005095..1005583(+) (pilE) [Entomomonas sp. E2T0]
MRTMQKGFTLIELMIVIAIIGILAAIAIPAYQDYIGRAQMAEALSLASGQKGAIAEYYSSNNQCPKNNTSTTAGGIASPS
KIAGKYVLSVTTGDASGGTITLGSATITPVCQIDAKMRNTGVNGDIAGGTLSLKMGVTSGAFQWGCSSADIDDKYLPSTC
QK

Nucleotide


Download         Length: 489 bp        

>NTDB_id=674620 MTZ49_RS04785 WP_319804744.1 1005095..1005583(+) (pilE) [Entomomonas sp. E2T0]
ATGAGAACTATGCAAAAAGGTTTTACTTTAATCGAATTAATGATCGTAATTGCAATTATCGGTATTCTAGCTGCGATTGC
TATCCCAGCATACCAAGATTACATTGGTCGTGCTCAAATGGCTGAAGCTTTAAGCTTAGCTTCTGGTCAAAAAGGTGCAA
TAGCTGAATACTATAGTTCAAATAATCAGTGTCCAAAAAACAATACTTCAACTACAGCAGGTGGTATTGCTTCACCTTCT
AAAATCGCTGGTAAATATGTATTATCAGTAACTACTGGTGATGCTAGTGGTGGTACTATTACACTTGGTTCTGCTACAAT
TACTCCTGTATGTCAAATTGATGCTAAAATGAGAAATACTGGTGTTAATGGTGATATCGCTGGTGGTACTTTATCATTAA
AAATGGGTGTAACTTCAGGTGCTTTCCAATGGGGTTGTAGCTCAGCTGATATCGACGATAAATACTTACCATCTACTTGC
CAAAAATAA

Domains

Predicted by InterproScan.

Pilin (bacterial filament) (Pilin)

(37-161)

Prokaryotic N-terminal methylation motif (N_methyl)

(4-27)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilE Neisseria gonorrhoeae strain FA1090

46.893

100

0.512
  pilE Neisseria gonorrhoeae MS11

46.328

100

0.506
  pilE Neisseria elongata subsp. glycolytica ATCC 29315

35.678

100

0.438
  comP Acinetobacter baylyi ADP1

40.252

98.148

0.395
  pilA2 Legionella pneumophila strain ERS1305867

38.788

100

0.395
  pilA2 Legionella pneumophila str. Paris

38.788

100

0.395
  pilA Acinetobacter nosocomialis M2

38.509

99.383

0.383
  pilA/pilA1 Eikenella corrodens VA1

36.686

100

0.383