Detailed information NTG0672408

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: OIE83_RS23920
• Genome accession: NZ_CP109188
• Coordinates: 5280220..5280903 (+)
• Length: 227 a.a.
• NCBI ID: WP_031091966.1
• Uniprot ID: A0ABU8A1V4
• Organism: Streptomyces sp. NBC_01708
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 5275220..5285903

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OIE83_RS23890 (OIE83_23880)	-	5276606..5276800 (+)	195	WP_073746901.1	hypothetical protein	-
OIE83_RS23895 (OIE83_23885)	-	5276920..5277267 (+)	348	WP_129262945.1	DUF1330 domain-containing protein	-
OIE83_RS23910 (OIE83_23900)	tig	5277834..5279246 (+)	1413	WP_099172567.1	trigger factor	-
OIE83_RS23915 (OIE83_23905)	-	5279547..5280152 (+)	606	WP_099172994.1	ATP-dependent Clp protease proteolytic subunit	-
OIE83_RS23920 (OIE83_23910)	clpP	5280220..5280903 (+)	684	WP_031091966.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OIE83_RS23925 (OIE83_23915)	clpX	5281060..5282358 (+)	1299	WP_099172566.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OIE83_RS23930 (OIE83_23920)	-	5282456..5282842 (+)	387	WP_147985112.1	type II toxin-antitoxin system RelE/ParE family toxin	-
OIE83_RS23935 (OIE83_23925)	-	5282839..5283144 (+)	306	WP_124276497.1	helix-turn-helix transcriptional regulator	-
OIE83_RS23940 (OIE83_23930)	-	5283296..5284315 (-)	1020	WP_329211054.1	hypothetical protein	-

Sequence

Protein

• Length: 227 a.a.
• Molecular weight: 24784.12 Da
• Isoelectric Point: 4.6800

>NTDB_id=672408 OIE83_RS23920 WP_031091966.1 5280220..5280903(+) (clpP) [Streptomyces sp. NBC_01708]
MVNTHMNNFSGASASGLYTGPQVDNRYVVPRFVERTSQGVREYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMD
PDRDISIYINSPGGSFTALTAIYDTMQFVKPDIQTVCMGQAASAAAVLLAAGTPGKRMALPHARVLIHQPSSQTGREQLS
DLEIAANEILRMRTQLEEMLAKHSTTPLEKISEDIERDKILTADDALAYGLVDQIVSTRKTTAGASV

Nucleotide

• Length: 684 bp

>NTDB_id=672408 OIE83_RS23920 WP_031091966.1 5280220..5280903(+) (clpP) [Streptomyces sp. NBC_01708]
ATGGTGAACACCCACATGAACAACTTCTCCGGCGCCTCCGCGAGCGGTCTCTACACCGGCCCGCAGGTGGACAACCGCTA
CGTCGTCCCGCGCTTCGTGGAGCGCACCTCGCAGGGTGTGCGTGAGTACGACCCGTACGCGAAGCTCTTCGAGGAGCGCG
TGATCTTCCTCGGCGTCCAGATCGACGACGCCTCGGCCAACGACGTCATGGCGCAGCTGCTGTGCCTGGAGTCGATGGAC
CCGGACCGTGACATCTCGATCTACATCAACAGCCCCGGCGGCTCGTTCACCGCGCTCACCGCGATCTACGACACGATGCA
GTTCGTGAAGCCGGACATCCAGACGGTCTGCATGGGCCAGGCGGCCTCCGCCGCCGCCGTCCTGCTGGCCGCGGGCACCC
CGGGCAAGCGCATGGCGCTCCCGCACGCCCGTGTGCTGATCCACCAGCCGTCCTCGCAGACCGGCCGTGAGCAGCTCTCC
GACCTGGAGATCGCGGCCAACGAGATCCTGCGGATGCGTACCCAGCTCGAGGAGATGCTGGCGAAGCACTCCACCACCCC
GCTGGAGAAGATCAGCGAGGACATCGAGCGCGACAAGATCCTTACGGCGGACGACGCACTCGCGTACGGTCTGGTGGACC
AGATCGTGTCCACCCGTAAGACCACCGCAGGCGCATCCGTCTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (38-218)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	50	83.7	0.419
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	47.872	82.819	0.396
clpP	Lactococcus lactis subsp. cremoris KW2	44.503	84.141	0.374
clpP	Streptococcus thermophilus LMG 18311	43.814	85.463	0.374
clpP	Streptococcus thermophilus LMD-9	43.814	85.463	0.374
clpP	Streptococcus mutans UA159	44.211	83.7	0.37
clpP	Streptococcus pyogenes JRS4	43.299	85.463	0.37
clpP	Streptococcus pyogenes MGAS315	43.299	85.463	0.37
clpP	Streptococcus pneumoniae Rx1	43.75	84.581	0.37
clpP	Streptococcus pneumoniae D39	43.75	84.581	0.37
clpP	Streptococcus pneumoniae R6	43.75	84.581	0.37
clpP	Streptococcus pneumoniae TIGR4	43.75	84.581	0.37
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	43.979	84.141	0.37