Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   MUA83_RS04995 Genome accession   NZ_CP094763
Coordinates   1017995..1018981 (+) Length   328 a.a.
NCBI ID   WP_252549970.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IVB6221     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 1012995..1023981
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA83_RS04970 (MUA83_04965) opp4B 1013208..1014170 (+) 963 WP_000593417.1 oligopeptide ABC transporter permease -
  MUA83_RS04975 (MUA83_04970) opp4C 1014182..1015063 (+) 882 WP_001180266.1 oligopeptide ABC transporter permease -
  MUA83_RS04980 (MUA83_04975) trpS 1015105..1016094 (-) 990 WP_000448935.1 tryptophan--tRNA ligase -
  MUA83_RS04985 (MUA83_04980) spxA 1016389..1016784 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  MUA83_RS04990 (MUA83_04985) mecA 1017155..1017874 (+) 720 WP_262529744.1 adaptor protein MecA -
  MUA83_RS04995 (MUA83_04990) coiA 1017995..1018981 (+) 987 WP_252549970.1 competence protein CoiA Machinery gene
  MUA83_RS05000 (MUA83_04995) pepF 1019029..1020837 (+) 1809 WP_000082725.1 oligoendopeptidase F -
  MUA83_RS05005 (MUA83_05000) yjbH 1021297..1022103 (-) 807 WP_000896697.1 protease adaptor protein YjbH -
  MUA83_RS05010 (MUA83_05005) - 1022126..1022491 (-) 366 WP_000214066.1 truncated hemoglobin YjbI -
  MUA83_RS05015 (MUA83_05010) - 1022595..1023188 (-) 594 WP_252549968.1 CYTH domain-containing protein -
  MUA83_RS05020 (MUA83_05015) - 1023374..1023721 (+) 348 WP_001242107.1 hypothetical protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38761.31 Da        Isoelectric Point: 9.6529

>NTDB_id=672074 MUA83_RS04995 WP_252549970.1 1017995..1018981(+) (coiA) [Staphylococcus aureus strain IVB6221]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNESIKHYKSKLILAQMIQQQGCKV
EIEAFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPITRKL
HTFNLEKKQIMMFQQIQYIGGHKYVAEKRNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLH
LTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLVSDNLNYFKLKKFIVALESKTAIIEKLINNYLNISSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=672074 MUA83_RS04995 WP_252549970.1 1017995..1018981(+) (coiA) [Staphylococcus aureus strain IVB6221]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGCGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAATCGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGGCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATATAGGCGGGCACAAATATGTCGCTGA
AAAAAGGAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAATTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAGTTGCAT
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGTAAGTGACAATCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTAGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-307)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

96.951

100

0.97
  coiA Staphylococcus aureus MW2

96.951

100

0.97