Detailed information NTG0672075

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG957_RS27010
• Genome accession: NZ_CP109174
• Coordinates: 6058708..6060006 (+)
• Length: 432 a.a.
• NCBI ID: WP_030921263.1
• Uniprot ID: A0ABV2UFH0
• Organism: Streptomyces sp. NBC_01718
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6053708..6065006

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG957_RS26980 (OG957_26990)	-	6054832..6055026 (+)	195	WP_030921275.1	hypothetical protein	-
OG957_RS26995 (OG957_27005)	tig	6055561..6056949 (+)	1389	WP_327124916.1	trigger factor	-
OG957_RS27000 (OG957_27010)	-	6057214..6057819 (+)	606	WP_267008104.1	ATP-dependent Clp protease proteolytic subunit	-
OG957_RS27005 (OG957_27015)	clpP	6057867..6058550 (+)	684	WP_030921266.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG957_RS27010 (OG957_27020)	clpX	6058708..6060006 (+)	1299	WP_030921263.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG957_RS27015 (OG957_27025)	-	6060082..6061065 (-)	984	WP_327124915.1	hypothetical protein	-
OG957_RS27020 (OG957_27030)	-	6061204..6063825 (+)	2622	WP_371796232.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47270.09 Da
• Isoelectric Point: 4.8824

>NTDB_id=672075 OG957_RS27010 WP_030921263.1 6058708..6060006(+) (clpX) [Streptomyces sp. NBC_01718]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLERIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRTIGKNDGGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=672075 OG957_RS27010 WP_030921263.1 6058708..6060006(+) (clpX) [Streptomyces sp. NBC_01718]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
TGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCGGAGACCT
CCGAGGTGCGGTGGGAGGAACTCCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGTCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCAGGCGAGAACGGCGGCGCGCAGGGCCG
GGACGACGCCATCGAGCTGGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTCCTCGCGCAGA
CGCTGGCCCGCATGCTCAACGTTCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATTCTGCTGAAGCTGATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGTGATGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTACCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCGCCGGCCTGGAGAGGATCATCGAGTCCCGGGCGGGTGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGCGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGTCTCCCCGTGCTGACCTCGGTCCACAACCTGGACCGC
GAGGCGCTGCTGCAGATCCTCGTCGAGCCGCGCAACGCACTGGTGAAGCAGTACCAGCGGCTGTTCGAACTCGACGGTGT
GGAGCTGGACTTCGACCGCCCGGCGCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACCGGCGCGCGTGGTCTTC
GGGCCATCATGGAGGAGGTCCTGCAGTCCGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGCGTCGTCATCACG
GCGGACGTGGTCCGCAACAACGTCAACCCGACGCTGGTCCCGCGCGAGCCGCGCACGATCGGCAAGAACGACGGCGGACG
GCACGAGAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.056	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.37	0.509