Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   MOJ78_RS10210 Genome accession   NZ_CP094656
Coordinates   1989160..1990407 (+) Length   415 a.a.
NCBI ID   WP_304981075.1    Uniprot ID   -
Organism   Alkalihalobacillus sp. AL-G     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 1984160..1995407
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MOJ78_RS10185 (MOJ78_10165) ymfI 1985244..1985966 (+) 723 WP_304981070.1 elongation factor P 5-aminopentanone reductase -
  MOJ78_RS10190 (MOJ78_10170) - 1986042..1986299 (+) 258 WP_304981071.1 DUF3243 domain-containing protein -
  MOJ78_RS10195 (MOJ78_10175) - 1986592..1987365 (+) 774 WP_304981072.1 DUF3388 domain-containing protein -
  MOJ78_RS10200 (MOJ78_10180) - 1987382..1988269 (+) 888 WP_304981073.1 RodZ domain-containing protein -
  MOJ78_RS10205 (MOJ78_10185) pgsA 1988428..1989006 (+) 579 WP_304981074.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  MOJ78_RS10210 (MOJ78_10190) cinA 1989160..1990407 (+) 1248 WP_304981075.1 competence/damage-inducible protein A Machinery gene
  MOJ78_RS10215 (MOJ78_10195) recA 1990503..1990709 (+) 207 WP_370529790.1 hypothetical protein Machinery gene
  MOJ78_RS10220 (MOJ78_10200) recA 1991070..1991912 (+) 843 Protein_1973 recombinase RecA -
  MOJ78_RS10225 (MOJ78_10205) rny 1992179..1993744 (+) 1566 WP_304981076.1 ribonuclease Y -
  MOJ78_RS10230 (MOJ78_10210) - 1993945..1994739 (+) 795 WP_304981077.1 TIGR00282 family metallophosphoesterase -
  MOJ78_RS10235 (MOJ78_10215) spoVS 1994840..1995100 (+) 261 WP_015758542.1 stage V sporulation protein SpoVS -

Sequence

Protein


Download         Length: 415 a.a.        Molecular weight: 45888.56 Da        Isoelectric Point: 4.8746

>NTDB_id=670386 MOJ78_RS10210 WP_304981075.1 1989160..1990407(+) (cinA) [Alkalihalobacillus sp. AL-G]
MNAEIIAIGSELLLGQIANTNAQFISKRLAEQGINVFYHSVVGDNSERLVSVIETAIQRSDLLIFTGGLGPTKDDLTKET
IAQYLGTSLVENGEAMQQINAYYKKTDQIMSENNRRQALVFDGAEVLPNKNGMAPGIALEHDKKIYMLFPGPPKELQPMF
INYGIPFLQQYREDDSLIYSRVLRFYGIGESSLETKLMDMIDEQTNPTIAPLAGNFEVTLRLTAKCETTAKGIEMIEKVE
QKIFERVGDCFYGYDETTLADEVMKTLKTRSKTVSCAESLTGGSFGQELTKISGAGQVLKGGIICYQNEIKKNQLKIPEQ
ILEQDGAVSEVCAKLMAENVRELFKSDYGIGFTGVAGPNEMEGKPPGTVFVGIATPEETFVYPLRLAGGRNAVRTRTVNY
GLFYLKKLLEEGTKK

Nucleotide


Download         Length: 1248 bp        

>NTDB_id=670386 MOJ78_RS10210 WP_304981075.1 1989160..1990407(+) (cinA) [Alkalihalobacillus sp. AL-G]
GTGAATGCAGAAATTATTGCGATCGGGTCAGAACTACTGTTAGGACAGATTGCAAATACGAATGCACAATTTATTTCGAA
ACGTCTTGCGGAACAAGGAATCAATGTGTTTTATCACTCTGTTGTCGGTGATAACAGCGAGCGCTTGGTCTCAGTAATTG
AAACAGCGATACAACGATCAGATTTACTAATCTTTACTGGGGGGCTTGGACCGACAAAAGACGACCTTACAAAAGAAACG
ATTGCTCAGTATCTTGGAACTTCTCTTGTAGAAAATGGTGAGGCAATGCAACAAATTAATGCCTATTATAAAAAGACGGA
TCAGATCATGTCAGAAAACAATCGACGTCAGGCACTCGTGTTTGACGGTGCTGAAGTTTTACCGAACAAGAACGGAATGG
CACCCGGAATTGCCCTTGAGCATGACAAGAAAATTTATATGCTTTTTCCAGGACCGCCGAAGGAATTACAACCAATGTTC
ATCAATTACGGCATTCCGTTTTTACAACAGTATCGTGAGGATGATTCATTAATTTATTCAAGGGTATTGCGTTTTTATGG
AATTGGTGAATCTTCGCTTGAAACGAAACTGATGGATATGATCGATGAGCAAACCAATCCGACGATCGCTCCACTTGCTG
GCAACTTCGAAGTCACCTTAAGATTAACGGCTAAATGTGAAACAACGGCTAAAGGCATTGAAATGATCGAAAAAGTTGAA
CAGAAAATTTTCGAACGAGTTGGGGATTGTTTTTATGGGTACGATGAAACGACATTGGCTGATGAGGTGATGAAAACACT
TAAGACGCGAAGTAAAACGGTATCATGTGCCGAAAGCTTAACCGGTGGTTCATTCGGTCAAGAACTGACAAAGATCTCAG
GTGCAGGACAGGTTTTAAAAGGTGGAATCATCTGTTATCAGAACGAAATCAAAAAGAACCAATTGAAGATTCCGGAACAA
ATACTCGAACAGGACGGGGCGGTAAGTGAAGTGTGCGCGAAATTGATGGCAGAGAATGTCCGTGAACTGTTCAAGAGTGA
TTATGGAATTGGATTTACAGGTGTCGCCGGACCGAACGAGATGGAAGGGAAGCCGCCTGGGACTGTTTTTGTAGGAATCG
CAACACCTGAAGAAACATTCGTTTACCCGCTTCGCTTAGCTGGCGGCCGGAATGCAGTACGCACGAGAACAGTCAATTAC
GGGCTGTTTTACTTGAAAAAGTTACTCGAAGAAGGAACGAAAAAATAA

Domains

Predicted by InterproScan.

Probable molybdopterin binding domain (MoCF_biosynth)

(5-169)

Damage-inducible protein CinA KH domain (CinA_KH)

(180-253)

Competence-damaged protein (CinA)

(257-408)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

55.012

98.554

0.542
  cinA Streptococcus mitis SK321

45.823

100

0.463
  cinA Streptococcus pneumoniae TIGR4

45.823

100

0.463
  cinA Streptococcus mitis NCTC 12261

45.585

100

0.46
  cinA Streptococcus pneumoniae Rx1

45.346

100

0.458
  cinA Streptococcus pneumoniae R6

45.346

100

0.458
  cinA Streptococcus pneumoniae D39

45.107

100

0.455
  cinA Streptococcus mutans UA159

44.527

96.867

0.431