Detailed information NTG0670102

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: MST16_RS15195
• Genome accession: NZ_CP094541
• Coordinates: 3078149..3079207 (-)
• Length: 352 a.a.
• NCBI ID: WP_078189383.1
• Uniprot ID: -
• Organism: Acinetobacter sp. YH16040_T
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3073149..3084207

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MST16_RS15170 (MST16_15140)	aroK	3073519..3074064 (-)	546	WP_078189378.1	shikimate kinase AroK	-
MST16_RS15175 (MST16_15145)	pilQ	3074101..3076203 (-)	2103	WP_180088921.1	type IV pilus secretin PilQ	Machinery gene
MST16_RS15180 (MST16_15150)	pilP	3076220..3076747 (-)	528	WP_078192530.1	pilus assembly protein PilP	Machinery gene
MST16_RS15185 (MST16_15155)	pilO	3076744..3077466 (-)	723	WP_168378181.1	type 4a pilus biogenesis protein PilO	Machinery gene
MST16_RS15190 (MST16_15160)	pilN	3077463..3078149 (-)	687	WP_078189382.1	PilN domain-containing protein	Machinery gene
MST16_RS15195 (MST16_15165)	comM	3078149..3079207 (-)	1059	WP_078189383.1	pilus assembly protein PilM	Machinery gene
MST16_RS15200 (MST16_15170)	ponA	3079373..3081913 (+)	2541	WP_180092204.1	penicillin-binding protein PBP1a	-
MST16_RS15205 (MST16_15175)	-	3081967..3082770 (-)	804	WP_180092277.1	putative RNA methyltransferase	-
MST16_RS15210 (MST16_15180)	mraY	3082848..3083966 (-)	1119	WP_078189386.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 38926.53 Da
• Isoelectric Point: 4.4858

>NTDB_id=670102 MST16_RS15195 WP_078189383.1 3078149..3079207(-) (comM) [Acinetobacter sp. YH16040_T]
MLRLYRKPNKGLIGVDISSTSVKVLELSVKSGRYWVESYALVPLPEGSVVEKNILNPEAVGDCLERAINLANTQTTNAAL
AVPTSMVITKIIEMDADMNDDEREIQIRDDAEQYIPFPLDEASLDFEVLPDRLSNPNRVNVLLVATRIENVEARAEVIQL
AGLTPKIGDVESFAIENAFKVFSDTLPMGVNTVGILDIGHSMTTLSVMQNNKVIYTREQVFGGKQLTQEIQNRYALSFEE
AGRAKKTRALPDDYDVEVLEPFLEAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQIDIKKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=670102 MST16_RS15195 WP_078189383.1 3078149..3079207(-) (comM) [Acinetobacter sp. YH16040_T]
GTGCTCAGGTTATATCGTAAGCCAAATAAGGGGTTAATAGGAGTAGATATTAGTTCGACTTCTGTTAAGGTTTTGGAACT
TTCTGTAAAGAGTGGGCGGTATTGGGTAGAAAGCTATGCTTTGGTACCATTACCAGAAGGAAGTGTTGTTGAAAAGAACA
TATTGAATCCGGAAGCTGTCGGTGACTGTTTAGAGCGCGCAATTAATTTGGCCAATACACAGACGACCAATGCAGCTTTG
GCGGTTCCAACCTCGATGGTGATTACAAAAATCATCGAAATGGACGCAGATATGAATGATGATGAACGTGAAATTCAGAT
TCGTGATGATGCTGAGCAATATATTCCGTTCCCACTTGATGAAGCGAGCCTTGATTTTGAGGTCTTGCCGGATCGTTTAT
CCAATCCAAATCGTGTCAATGTTCTACTTGTCGCTACGCGTATTGAAAATGTCGAAGCGCGTGCGGAAGTTATTCAGCTT
GCGGGTCTGACACCAAAAATTGGCGATGTAGAAAGCTTTGCAATTGAAAATGCATTTAAAGTTTTCTCAGATACTTTGCC
AATGGGTGTAAATACCGTGGGTATTTTAGATATTGGTCATAGTATGACGACCTTATCTGTTATGCAGAATAACAAAGTGA
TTTATACCCGTGAGCAAGTGTTTGGTGGCAAACAATTGACACAGGAAATTCAAAATCGCTATGCATTGTCTTTCGAAGAA
GCGGGTCGTGCGAAAAAAACACGTGCCTTGCCAGATGACTATGATGTTGAAGTCTTAGAACCTTTCTTAGAAGCTGTCGT
TCAACAAGCAGCGCGTTCTTTACAGTTCTTCTTCTCATCTTCACAGTTCAACGAAATTGACCACATCTTATTGGCAGGGG
GGAATGCCAATATTCCGGGGCTTGCAAAACTACTTCAACAAAAATTGGGTTACCGTGTCACGATTGCCAATCCATTCTTA
CAAATGGGTTTTTCACCTCAAATTGATATTAAAAAAATTGAAAATGATGCCTCATCACTCATGGTGGCATGCGGTCTAGC
ATTGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	84.659	100	0.847
pilM	Acinetobacter baumannii D1279779	84.375	100	0.844
comM	Acinetobacter baylyi ADP1	79.261	100	0.793
pilM	Legionella pneumophila strain ERS1305867	40.678	100	0.409