Detailed information    

insolico Bioinformatically predicted

Overview


Name   cinA   Type   Machinery gene
Locus tag   MQC90_RS09210 Genome accession   NZ_CP094361
Coordinates   1762821..1764071 (+) Length   416 a.a.
NCBI ID   WP_003231847.1    Uniprot ID   A0A199WIX6
Organism   Bacillus subtilis strain NCIB 3610     
Function   unknown (predicted from homology)   
Unclear

Genomic Context


Location: 1757821..1769071
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MQC90_RS09180 ymfH 1757911..1759197 (+) 1287 WP_003244823.1 pitrilysin family protein -
  MQC90_RS09185 efpI 1759252..1759980 (+) 729 WP_003244676.1 EF-P-5 aminopentanone reductase -
  MQC90_RS09190 ymfJ 1760061..1760318 (+) 258 WP_003245199.1 DUF3243 domain-containing protein -
  MQC90_RS09195 - 1760448..1761239 (+) 792 WP_003220998.1 YmfK family protein -
  MQC90_RS09200 rodZ 1761306..1762172 (+) 867 WP_010886511.1 cell shape determination protein RodZ -
  MQC90_RS09205 pgsA 1762222..1762803 (+) 582 WP_003244753.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  MQC90_RS09210 cinA 1762821..1764071 (+) 1251 WP_003231847.1 competence/damage-inducible protein A Machinery gene
  MQC90_RS09215 recA 1764244..1765290 (+) 1047 WP_003245789.1 recombinase RecA Machinery gene
  MQC90_RS09220 pbpX 1765458..1766633 (+) 1176 WP_003245877.1 serine hydrolase domain-containing protein -
  MQC90_RS09225 rny 1766909..1768471 (+) 1563 WP_003221010.1 ribonuclease Y -

Sequence


Protein


Download         Length: 416 a.a.        Molecular weight: 45537.85 Da        Isoelectric Point: 5.3737

>NTDB_id=669278 MQC90_RS09210 WP_003231847.1 1762821..1764071(+) (cinA) [Bacillus subtilis strain NCIB 3610]
MEFPKKAEIIAVGSELLLGQIANTNAQFISKQLAEIGVNVFYHTAVGDNPERLKQVIRIAEERSDFIIFSGGLGPTKDDL
TKETIANTLGRPLVLNDEAFQSIEDYFKRTKRTMSPNNRKQALVIEGSDVLANHFGMAPGMLTEHESRYYMLLPGPPSEL
RPMFENEAKPLLLKKMGSNEKIVSTVLRFFGIGESQLEADLEDIIDAQTNPTIAPLAADGEVTLRLTAKHADEKETERLL
KETEAVILERVGEFFYGYDDTSLVKELSIACKEKGITISAAESFTGGLFSEWLTDHSGASKLFAGGVVCYTNDVKQNVLG
VKKETLDRFGAVSKECASELAKGVQKLTGSDIGISFTGVAGPDAQEGHEPGHVFIGISANGKEEVHEFHFAGSRTGIRKR
GAKYGCHLILKLLEQK

Nucleotide


Download         Length: 1251 bp        

>NTDB_id=669278 MQC90_RS09210 WP_003231847.1 1762821..1764071(+) (cinA) [Bacillus subtilis strain NCIB 3610]
ATGGAATTTCCAAAAAAAGCAGAAATAATTGCAGTCGGTTCAGAGTTGCTGCTTGGTCAAATCGCCAATACAAATGCTCA
ATTTATCAGCAAACAGCTCGCTGAAATCGGGGTCAACGTATTTTATCATACAGCGGTCGGAGATAACCCGGAGCGGCTGA
AGCAGGTCATCCGCATTGCTGAAGAACGCTCTGACTTCATTATTTTTTCAGGAGGGCTTGGACCCACAAAAGATGATCTG
ACGAAAGAAACGATTGCAAATACGCTGGGACGTCCGCTTGTGTTAAATGATGAGGCATTCCAATCCATTGAGGACTATTT
CAAACGAACAAAACGCACGATGTCACCTAATAACCGAAAACAGGCGCTTGTGATCGAAGGCTCTGACGTGCTGGCGAATC
ACTTTGGAATGGCCCCGGGAATGCTCACAGAGCATGAATCGCGCTATTATATGCTTCTTCCTGGACCGCCGAGCGAATTG
CGTCCAATGTTTGAAAACGAGGCAAAGCCTCTTCTGCTGAAAAAGATGGGTTCAAATGAAAAAATTGTGTCAACTGTTCT
TCGCTTTTTCGGTATCGGTGAATCTCAGCTTGAAGCCGATTTGGAAGATATTATTGATGCACAAACCAATCCGACAATTG
CGCCTTTGGCGGCTGATGGAGAGGTGACGCTGCGTCTGACAGCCAAACACGCCGATGAAAAGGAAACAGAGCGTCTGTTA
AAAGAAACAGAGGCCGTTATCTTAGAGCGTGTCGGTGAATTTTTCTATGGTTACGATGATACTTCTCTTGTAAAAGAGCT
ATCTATAGCATGTAAGGAAAAAGGCATAACAATTTCTGCGGCAGAAAGCTTTACCGGAGGGCTGTTTTCTGAATGGCTGA
CGGATCATAGCGGTGCCTCAAAATTATTTGCCGGGGGCGTTGTTTGCTATACAAACGACGTGAAGCAGAATGTGCTTGGT
GTCAAGAAGGAAACATTAGATCGTTTTGGGGCGGTCAGCAAGGAGTGCGCATCCGAACTGGCTAAGGGTGTTCAAAAACT
CACTGGCAGCGATATCGGCATTAGCTTTACTGGTGTAGCAGGACCTGATGCTCAAGAAGGGCATGAGCCTGGGCATGTGT
TTATCGGCATTTCCGCAAATGGTAAAGAAGAGGTTCACGAGTTTCACTTTGCGGGCTCCAGAACGGGGATCAGAAAACGC
GGCGCTAAATACGGCTGCCATTTAATCTTAAAGCTTTTAGAGCAAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A199WIX6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

100

100

1

  cinA Streptococcus mitis NCTC 12261

45.694

100

0.459

  cinA Streptococcus mitis SK321

45.694

100

0.459

  cinA Streptococcus pneumoniae TIGR4

45.455

100

0.457

  cinA Streptococcus mutans UA159

46.005

99.279

0.457

  cinA Streptococcus pneumoniae Rx1

45.215

100

0.454

  cinA Streptococcus pneumoniae R6

45.215

100

0.454

  cinA Streptococcus pneumoniae D39

44.976

100

0.452

  cinA Streptococcus suis isolate S10

41.379

90.625

0.375


Multiple sequence alignment