Detailed information NTG0668700

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: OG713_RS27500
• Genome accession: NZ_CP108987
• Coordinates: 6207303..6207983 (+)
• Length: 226 a.a.
• NCBI ID: WP_020127827.1
• Uniprot ID: A0A6M4WQU9
• Organism: Streptomyces sp. NBC_00723
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 6202303..6212983

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG713_RS27470 (OG713_27470)	-	6202390..6202602 (+)	213	WP_405964301.1	excisionase family DNA-binding protein	-
OG713_RS27475 (OG713_27475)	-	6202602..6203747 (+)	1146	WP_405964302.1	tyrosine-type recombinase/integrase	-
OG713_RS27490 (OG713_27490)	tig	6204407..6205780 (+)	1374	WP_054244930.1	trigger factor	-
OG713_RS27495 (OG713_27495)	clpP	6206314..6206919 (+)	606	WP_028806515.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG713_RS27500 (OG713_27500)	clpP	6207303..6207983 (+)	681	WP_020127827.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG713_RS27505 (OG713_27505)	clpX	6208165..6209454 (+)	1290	WP_020127826.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG713_RS27510 (OG713_27510)	-	6209628..6210101 (-)	474	WP_405964303.1	hypothetical protein	-
OG713_RS27515 (OG713_27515)	-	6210155..6211126 (-)	972	WP_405964304.1	hypothetical protein	-

Sequence

Protein

• Length: 226 a.a.
• Molecular weight: 25007.42 Da
• Isoelectric Point: 4.5652

>NTDB_id=668700 OG713_RS27500 WP_020127827.1 6207303..6207983(+) (clpP) [Streptomyces sp. NBC_00723]
MNDFPGSGIYARTEAEYTGPRAESRYVIPRFVERTSQGVREYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMDP
DRDISVYINSPGGSFTALTAIYDTMQFVKPDIQTVCMGQAASAAAILLAAGTPGKRMALPNARVLIHQPYSETGRGQVSD
LEIAANEILRMRAQLEDMLAKHSTTPIEKIREDIERDKILTAEDALAYGLIDQIISTRKLNNNSLV

Nucleotide

• Length: 681 bp

>NTDB_id=668700 OG713_RS27500 WP_020127827.1 6207303..6207983(+) (clpP) [Streptomyces sp. NBC_00723]
GTGAACGACTTCCCCGGCAGCGGCATCTACGCCCGCACCGAGGCCGAATACACCGGCCCTCGCGCCGAATCCCGCTACGT
CATCCCGCGCTTCGTCGAGCGCACCTCGCAGGGCGTCCGCGAGTACGACCCGTACGCGAAGCTCTTCGAGGAGCGCGTGA
TCTTCCTCGGCGTGCAGATCGACGACGCCTCCGCCAACGACGTCATGGCGCAGCTGCTGTGCCTGGAGTCGATGGACCCC
GACCGGGACATCTCGGTCTACATCAACAGCCCGGGCGGCTCCTTCACGGCGCTGACCGCGATCTACGACACGATGCAGTT
CGTGAAGCCCGACATCCAGACGGTCTGCATGGGTCAGGCGGCCTCCGCCGCCGCGATCCTGCTGGCCGCCGGTACGCCGG
GCAAGCGCATGGCGCTGCCGAACGCGCGCGTACTGATCCACCAGCCGTACAGCGAGACGGGCCGCGGTCAGGTCTCCGAC
CTGGAGATCGCCGCCAACGAGATCCTCCGGATGCGCGCGCAGCTGGAGGACATGCTGGCCAAGCACTCGACCACGCCGAT
CGAGAAGATCCGTGAGGACATCGAGCGCGACAAGATCCTCACGGCCGAGGACGCGCTGGCGTACGGCCTGATCGACCAGA
TCATCTCCACCCGCAAGCTGAACAACAACTCGCTCGTTTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (37-217)

3D structure

• AlphaFold DB: A0A6M4WQU9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	52.105	84.071	0.438
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	50	83.186	0.416
clpP	Lactococcus lactis subsp. cremoris KW2	45.274	88.938	0.403
clpP	Streptococcus mutans UA159	45.729	88.053	0.403
clpP	Streptococcus thermophilus LMD-9	46.667	86.283	0.403
clpP	Streptococcus thermophilus LMG 18311	46.667	86.283	0.403
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	44.279	88.938	0.394
clpP	Streptococcus pyogenes MGAS315	45.641	86.283	0.394
clpP	Streptococcus pyogenes JRS4	45.641	86.283	0.394
clpP	Streptococcus pneumoniae TIGR4	44.898	86.726	0.389
clpP	Streptococcus pneumoniae R6	44.898	86.726	0.389
clpP	Streptococcus pneumoniae Rx1	44.898	86.726	0.389
clpP	Streptococcus pneumoniae D39	44.898	86.726	0.389