Detailed information NTG0668701

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG713_RS27505
• Genome accession: NZ_CP108987
• Coordinates: 6208165..6209454 (+)
• Length: 429 a.a.
• NCBI ID: WP_020127826.1
• Uniprot ID: A0A6M4WMS1
• Organism: Streptomyces sp. NBC_00723
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6203165..6214454

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG713_RS27490 (OG713_27490)	tig	6204407..6205780 (+)	1374	WP_054244930.1	trigger factor	-
OG713_RS27495 (OG713_27495)	clpP	6206314..6206919 (+)	606	WP_028806515.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG713_RS27500 (OG713_27500)	clpP	6207303..6207983 (+)	681	WP_020127827.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG713_RS27505 (OG713_27505)	clpX	6208165..6209454 (+)	1290	WP_020127826.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG713_RS27510 (OG713_27510)	-	6209628..6210101 (-)	474	WP_405964303.1	hypothetical protein	-
OG713_RS27515 (OG713_27515)	-	6210155..6211126 (-)	972	WP_405964304.1	hypothetical protein	-
OG713_RS27520 (OG713_27520)	-	6211263..6213887 (+)	2625	WP_054244928.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 429 a.a.
• Molecular weight: 46908.76 Da
• Isoelectric Point: 4.7788

>NTDB_id=668701 OG713_RS27505 WP_020127826.1 6208165..6209454(+) (clpX) [Streptomyces sp. NBC_00723]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGQSREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIETRAGAKGIGFGATIRSKRELESKDQFEAVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQAVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDARGGRGPGEQKTA

Nucleotide

• Length: 1290 bp

>NTDB_id=668701 OG713_RS27505 WP_020127826.1 6208165..6209454(+) (clpX) [Streptomyces sp. NBC_00723]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAGCTCGCGGAGACGA
GCGAGGTCCGCTGGGAGGAACTCCCGAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGCTACGTGGTGGGCCAGGAACCC
GCCAAGAAGGCCCTGTCGGTAGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGTGAGAACGGCGGCGGCCAAAGCCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTCGGCCCCACCGGCTCGGGCAAGACGCTCCTGGCACAGA
CCCTGGCGCGCATGCTGAACGTCCCGTTCGCGATCGCCGACGCCACGGCGCTGACCGAGGCGGGCTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
TGAGATCGACAAGGTCGCGCGCAAGAGCGAGAACCCGTCCATCACCCGTGACGTGTCGGGCGAGGGCGTGCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCGGTCCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCTCGGGCCTGGAGAAGATCATCGAGACCCGGGCCGGCGC
CAAGGGCATCGGGTTCGGCGCGACGATCCGCTCCAAGCGCGAGCTGGAGTCCAAGGACCAGTTCGAGGCCGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCGGAGTTCATCGGCCGTCTCCCGGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCGCTCCTCCAGATCCTGATCGAGCCGCGCAACGCGCTGGTGAAGCAGTACCAGCGGCTCTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGGGAGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCCCGCGGCCTGC
GCGCGATCATGGAGGAAGTCCTCCAGGCGGTCATGTACGAGGTCCCCTCCCGCAAGGACGTGGCCCGCGTGGTCATCACG
GCGGACGTGGTCCTCTCCAACGTCAACCCGACCCTGATCCCGCGCGACGCACGCGGCGGCCGCGGCCCGGGCGAGCAGAA
GACCGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

3D structure

• AlphaFold DB: A0A6M4WMS1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.687	93.706	0.587
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.501	95.804	0.522