Detailed information NTG0666875

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: OG782_RS11840
• Genome accession: NZ_CP108800
• Coordinates: 2698581..2699264 (-)
• Length: 227 a.a.
• NCBI ID: WP_406450068.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00876
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2693581..2704264

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG782_RS11815 (OG782_11825)	-	2693618..2693974 (-)	357	WP_406450058.1	DUF4233 domain-containing protein	-
OG782_RS11820 (OG782_11830)	-	2693980..2695503 (-)	1524	WP_406450060.1	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	-
OG782_RS11825 (OG782_11835)	-	2695810..2695959 (-)	150	WP_406450062.1	hypothetical protein	-
OG782_RS11830 (OG782_11840)	-	2696093..2697052 (+)	960	WP_406450064.1	hypothetical protein	-
OG782_RS11835 (OG782_11845)	clpX	2697125..2698423 (-)	1299	WP_406450066.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG782_RS11840 (OG782_11850)	clpP	2698581..2699264 (-)	684	WP_406450068.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG782_RS11845 (OG782_11855)	-	2699345..2699950 (-)	606	WP_352121848.1	ATP-dependent Clp protease proteolytic subunit	-
OG782_RS11850 (OG782_11860)	tig	2700216..2701622 (-)	1407	WP_406450070.1	trigger factor	-
OG782_RS11865 (OG782_11875)	-	2702220..2702414 (-)	195	WP_136325240.1	hypothetical protein	-
OG782_RS11870 (OG782_11880)	-	2702895..2704046 (+)	1152	WP_406450072.1	acyltransferase family protein	-

Sequence

Protein

• Length: 227 a.a.
• Molecular weight: 24684.06 Da
• Isoelectric Point: 4.6747

>NTDB_id=666875 OG782_RS11840 WP_406450068.1 2698581..2699264(-) (clpP) [Streptomyces sp. NBC_00876]
MVNTHMNNFPGASASGLYTGPQVDNRYIVPRFVERTSQGVREYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMD
PDRDISIYINSPGGSFTALTAIYDTMQFVKPDIQTVCMGQAASAAAVLLAAGTPGKRLALPNARVLIHQPSSQTGREQLS
DLEIAANEILRMRAQLEELLAKHSTTPIEKIRDDIERDKILTADDALAYGLVDQIVATRKTAAGAAA

Nucleotide

• Length: 684 bp

>NTDB_id=666875 OG782_RS11840 WP_406450068.1 2698581..2699264(-) (clpP) [Streptomyces sp. NBC_00876]
ATGGTGAACACCCACATGAACAACTTCCCCGGCGCGTCCGCGAGCGGCCTCTACACCGGCCCGCAGGTGGACAACCGCTA
CATCGTCCCGCGCTTCGTGGAGCGCACCTCGCAGGGCGTGCGTGAGTACGACCCGTACGCGAAGCTCTTCGAGGAGCGCG
TGATCTTCCTCGGTGTGCAGATCGACGACGCGTCCGCCAACGACGTCATGGCGCAGCTGCTGTGCCTGGAGTCGATGGAC
CCGGACCGGGACATCTCGATCTACATCAACAGCCCCGGCGGCTCGTTCACCGCGCTCACCGCGATCTACGACACGATGCA
GTTCGTGAAGCCGGACATCCAGACGGTCTGCATGGGCCAGGCGGCCTCCGCCGCCGCCGTGCTGCTCGCCGCGGGCACGC
CGGGCAAGCGCCTGGCGCTGCCGAACGCGCGCGTCCTGATCCACCAGCCGTCCTCGCAGACCGGCCGTGAGCAGCTCTCC
GACCTGGAGATCGCGGCCAACGAGATCCTGCGGATGCGGGCCCAGCTGGAGGAGTTGCTGGCCAAGCACTCCACCACGCC
GATCGAGAAGATCCGGGACGACATCGAGCGGGACAAGATCCTGACCGCCGATGACGCCCTGGCCTACGGTCTGGTCGACC
AGATCGTCGCGACCCGTAAGACCGCGGCCGGAGCGGCCGCCTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (38-218)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	50.265	83.26	0.419
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	47.619	83.26	0.396
clpP	Streptococcus thermophilus LMD-9	44.845	85.463	0.383
clpP	Streptococcus thermophilus LMG 18311	44.845	85.463	0.383
clpP	Streptococcus pneumoniae Rx1	44.792	84.581	0.379
clpP	Streptococcus pneumoniae TIGR4	44.792	84.581	0.379
clpP	Streptococcus pneumoniae R6	44.792	84.581	0.379
clpP	Streptococcus pneumoniae D39	44.792	84.581	0.379
clpP	Streptococcus mutans UA159	45.263	83.7	0.379
clpP	Streptococcus pyogenes JRS4	45.263	83.7	0.379
clpP	Streptococcus pyogenes MGAS315	45.263	83.7	0.379
clpP	Lactococcus lactis subsp. cremoris KW2	44.503	84.141	0.374
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	43.979	84.141	0.37