Detailed information NTG0665379

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: OG623_RS23815
• Genome accession: NZ_CP108688
• Coordinates: 5317167..5317850 (+)
• Length: 227 a.a.
• NCBI ID: WP_362886120.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01012
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 5312167..5322850

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG623_RS23785 (OG623_23715)	-	5312308..5313471 (-)	1164	WP_406149119.1	acyltransferase family protein	-
OG623_RS23790 (OG623_23720)	-	5313964..5314158 (+)	195	WP_205020323.1	hypothetical protein	-
OG623_RS23805 (OG623_23735)	tig	5314791..5316221 (+)	1431	WP_406149121.1	trigger factor	-
OG623_RS23810 (OG623_23740)	-	5316494..5317099 (+)	606	WP_406151973.1	ATP-dependent Clp protease proteolytic subunit	-
OG623_RS23815 (OG623_23745)	clpP	5317167..5317850 (+)	684	WP_362886120.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG623_RS23820 (OG623_23750)	clpX	5318008..5319306 (+)	1299	WP_406149122.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG623_RS23825 (OG623_23755)	-	5319449..5319781 (+)	333	WP_406149123.1	type II toxin-antitoxin system RelE/ParE family toxin	-
OG623_RS23830 (OG623_23760)	-	5319778..5320083 (+)	306	WP_406149124.1	helix-turn-helix domain-containing protein	-
OG623_RS23835 (OG623_23765)	-	5320157..5321167 (-)	1011	WP_406149126.1	hypothetical protein	-

Sequence

Protein

• Length: 227 a.a.
• Molecular weight: 24794.11 Da
• Isoelectric Point: 4.6800

>NTDB_id=665379 OG623_RS23815 WP_362886120.1 5317167..5317850(+) (clpP) [Streptomyces sp. NBC_01012]
MVNTHMNNLSGASASGLYTGPQVDNRYIVPRFVERTSQGTREYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMD
PDRDISIYINSPGGSFTALTAIYDTMQFVKPDIQTVCMGQAASAAAVLLAAGTPGKRMALPHARVLIHQPSSQTGREQLS
DLEIAANEILRMRTQLEEMLARHSTTPLEKISEDIERDKILTADDALAYGLVDQIVSTRKTTAGASV

Nucleotide

• Length: 684 bp

>NTDB_id=665379 OG623_RS23815 WP_362886120.1 5317167..5317850(+) (clpP) [Streptomyces sp. NBC_01012]
ATGGTGAACACCCACATGAACAACCTCTCCGGCGCCTCAGCGAGCGGCCTCTACACCGGCCCGCAGGTGGACAACCGCTA
CATCGTGCCCCGTTTCGTGGAGCGGACCTCGCAGGGCACGCGTGAGTACGACCCGTACGCGAAGCTCTTCGAGGAGCGCG
TCATCTTCCTCGGCGTCCAGATCGACGACGCCTCGGCCAACGACGTCATGGCGCAGCTGCTGTGCCTGGAGTCGATGGAC
CCGGACCGTGACATCTCGATCTACATCAACAGCCCCGGCGGCTCGTTCACCGCGCTCACCGCGATCTACGACACGATGCA
GTTCGTGAAGCCGGACATCCAGACGGTCTGCATGGGCCAGGCCGCCTCCGCGGCCGCCGTCCTGCTGGCCGCCGGCACCC
CGGGCAAGCGCATGGCGCTCCCGCACGCCCGTGTGCTGATCCACCAGCCGTCCTCGCAGACCGGCCGTGAGCAGCTCTCC
GACCTGGAGATCGCGGCCAACGAGATCCTGCGGATGCGCACCCAGCTCGAGGAGATGCTGGCCAGGCACTCCACGACCCC
GCTGGAGAAGATCAGCGAGGACATCGAGCGCGACAAGATCCTTACCGCCGACGACGCACTCGCGTACGGTCTGGTGGACC
AGATCGTGTCCACCCGTAAGACCACCGCAGGCGCGTCCGTCTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (38-218)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	50	83.7	0.419
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	47.09	83.26	0.392
clpP	Lactococcus lactis subsp. cremoris KW2	44.503	84.141	0.374
clpP	Streptococcus thermophilus LMG 18311	43.814	85.463	0.374
clpP	Streptococcus thermophilus LMD-9	43.814	85.463	0.374
clpP	Streptococcus mutans UA159	44.211	83.7	0.37
clpP	Streptococcus pyogenes MGAS315	43.299	85.463	0.37
clpP	Streptococcus pyogenes JRS4	43.299	85.463	0.37
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	43.979	84.141	0.37
clpP	Streptococcus pneumoniae TIGR4	43.523	85.022	0.37
clpP	Streptococcus pneumoniae D39	43.523	85.022	0.37
clpP	Streptococcus pneumoniae Rx1	43.523	85.022	0.37
clpP	Streptococcus pneumoniae R6	43.523	85.022	0.37