Detailed information NTG0663798

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: MNO14_RS02990
• Genome accession: NZ_CP093340
• Coordinates: 662273..663433 (-)
• Length: 386 a.a.
• NCBI ID: WP_241946241.1
• Uniprot ID: -
• Organism: Luteimonas sp. S4-F44
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 657273..668433

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MNO14_RS02975 (MNO14_02975)	-	659803..660753 (+)	951	WP_241945316.1	Nudix family hydrolase	-
MNO14_RS02980 (MNO14_02980)	coaE	660767..661393 (-)	627	WP_241945317.1	dephospho-CoA kinase	-
MNO14_RS02985 (MNO14_02985)	pilD	661406..662269 (-)	864	WP_241945318.1	A24 family peptidase	Machinery gene
MNO14_RS02990 (MNO14_02990)	pilC	662273..663433 (-)	1161	WP_241946241.1	type II secretion system F family protein	Machinery gene
MNO14_RS02995 (MNO14_02995)	pilB	663656..665380 (-)	1725	WP_241945319.1	type IV-A pilus assembly ATPase PilB	Machinery gene
MNO14_RS03000 (MNO14_03000)	-	665494..665877 (-)	384	WP_241945320.1	hypothetical protein	-
MNO14_RS03005 (MNO14_03005)	aqpZ	666583..667284 (+)	702	WP_241945321.1	aquaporin Z	-
MNO14_RS03010 (MNO14_03010)	-	667357..668124 (-)	768	WP_241945322.1	hypothetical protein	-

Sequence

Protein

• Length: 386 a.a.
• Molecular weight: 41983.41 Da
• Isoelectric Point: 9.4210

>NTDB_id=663798 MNO14_RS02990 WP_241946241.1 662273..663433(-) (pilC) [Luteimonas sp. S4-F44]
MKGEQQSKSANLLRAELRRQGIQPTLVQPKRQPLLGGAGKAISARDIAIFSRQTATMMKSGVPVVQALEIIGNGQKNPRM
KQMVDGIRVDIEGGASIFEALSKYPVQFDELYRNLVRAGESAGALETVLDTIASYKESIESIKGKIKKALFYPAAIIAVA
ILVCAVLMVFVVPTFRETFESFGTDLPAFTELVFGISAMMVKWWWLIVIVVFASAFGFLFAFKRSPALQHGVDRTLLRLP
VVGRVLHNSSIARFARTLGVTFKAGVPLVEALDSVAGATGSSVYEHAVLRMRDDVAVGYQLNMAMRQTALFPHMVVQMTA
IGEEAGALDTMLFKVAEFYEEEVNNAVDAISSLLEPFVMVIIGTLVGAIVIAMYLPIFKLAMAATG

Nucleotide

• Length: 1161 bp

>NTDB_id=663798 MNO14_RS02990 WP_241946241.1 662273..663433(-) (pilC) [Luteimonas sp. S4-F44]
ATGAAGGGCGAGCAGCAGTCCAAGAGCGCGAACCTGTTGCGCGCCGAACTGCGCCGCCAAGGCATCCAGCCGACGCTGGT
GCAGCCCAAGCGCCAACCGCTGCTCGGTGGCGCCGGCAAGGCGATCTCGGCGCGCGACATCGCGATCTTCAGCCGCCAGA
CCGCGACGATGATGAAGTCCGGCGTGCCGGTGGTGCAGGCGCTGGAAATCATCGGCAACGGCCAGAAGAACCCGCGCATG
AAGCAGATGGTCGATGGCATCCGCGTCGACATCGAGGGCGGCGCCTCGATCTTCGAGGCGCTGAGCAAGTATCCGGTGCA
GTTCGACGAGCTCTACCGCAACCTGGTGCGCGCGGGCGAGTCGGCCGGCGCGCTGGAAACCGTGCTCGACACGATCGCTT
CGTACAAGGAGAGCATCGAGTCGATCAAGGGCAAGATCAAAAAGGCGCTGTTCTACCCGGCCGCGATCATCGCGGTCGCG
ATCCTGGTCTGCGCGGTGCTGATGGTGTTCGTCGTGCCGACGTTCCGCGAGACGTTCGAGAGCTTCGGCACCGACCTACC
CGCGTTCACCGAGCTGGTGTTCGGCATCTCGGCGATGATGGTGAAATGGTGGTGGCTGATCGTGATCGTGGTGTTCGCGT
CCGCGTTCGGCTTCCTGTTCGCGTTCAAGCGTTCCCCGGCGCTGCAGCACGGGGTGGACCGCACGCTGCTGCGCCTGCCC
GTGGTCGGCCGCGTGCTGCACAACTCGTCGATCGCGCGCTTCGCGCGCACGCTGGGTGTGACCTTCAAGGCCGGCGTGCC
GCTGGTCGAGGCGCTGGACTCGGTGGCCGGCGCGACCGGCAGTTCGGTCTATGAGCACGCGGTGCTGCGCATGCGCGACG
ACGTGGCCGTGGGCTACCAACTCAACATGGCGATGCGGCAGACCGCGTTGTTTCCGCACATGGTGGTGCAGATGACCGCG
ATCGGCGAGGAGGCGGGTGCGCTGGACACAATGCTGTTCAAGGTGGCCGAGTTCTACGAGGAAGAGGTCAACAATGCGGT
CGACGCGATCTCGAGTCTGCTCGAGCCGTTCGTGATGGTCATCATCGGCACCCTGGTCGGCGCGATCGTGATCGCGATGT
ACCTGCCAATCTTCAAACTCGCGATGGCGGCGACTGGCTGA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein F (T2SSF) (254-376)

• Type II secretion system (T2SS), protein F (T2SSF) (50-173)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Legionella pneumophila strain ERS1305867	52.48	99.223	0.521
pilC	Acinetobacter baylyi ADP1	51.444	98.705	0.508
pilC	Pseudomonas stutzeri DSM 10701	51.316	98.446	0.505
pilC	Acinetobacter baumannii D1279779	50.919	98.705	0.503
pilG	Neisseria gonorrhoeae MS11	42.368	98.446	0.417
pilG	Neisseria meningitidis 44/76-A	41.953	98.187	0.412
pilC	Vibrio cholerae strain A1552	38.587	95.337	0.368