Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   MNO09_RS11185 Genome accession   NZ_CP093325
Coordinates   1670335..1671573 (+) Length   412 a.a.
NCBI ID   WP_088107341.1    Uniprot ID   A0AB37YW45
Organism   Bacillus sp. N5-665     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 1665335..1676573
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MNO09_RS11160 (MNO09_11080) - 1666753..1667466 (+) 714 WP_000759595.1 SDR family oxidoreductase -
  MNO09_RS11165 (MNO09_11085) - 1667564..1667812 (+) 249 WP_000114455.1 DUF3243 domain-containing protein -
  MNO09_RS11170 (MNO09_11090) - 1667952..1668739 (+) 788 Protein_1744 DUF3388 domain-containing protein -
  MNO09_RS11175 (MNO09_11095) - 1668761..1669672 (+) 912 WP_000137478.1 helix-turn-helix domain-containing protein -
  MNO09_RS11180 (MNO09_11100) pgsA 1669736..1670314 (+) 579 WP_001052975.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  MNO09_RS11185 (MNO09_11105) cinA 1670335..1671573 (+) 1239 WP_088107341.1 competence/damage-inducible protein CinA Machinery gene
  MNO09_RS11190 (MNO09_11110) recA 1671717..1672325 (+) 609 Protein_1748 recombinase RecA -
  MNO09_RS11195 (MNO09_11115) - 1672423..1673046 (+) 624 WP_000301530.1 hypothetical protein -
  MNO09_RS11200 (MNO09_11120) - 1673315..1673737 (+) 423 Protein_1750 recombinase RecA -
  MNO09_RS11205 (MNO09_11125) rny 1674220..1675782 (+) 1563 WP_000099774.1 ribonuclease Y -

Sequence

Protein


Download         Length: 412 a.a.        Molecular weight: 45269.63 Da        Isoelectric Point: 5.2140

>NTDB_id=663609 MNO09_RS11185 WP_088107341.1 1670335..1671573(+) (cinA) [Bacillus sp. N5-665]
MNAEIIAVGTELLLGQIANTNAQFLSEKLASIGINVYYHTVVGDNNKRLQQAIEVAEERADILIFTGGLGPTKDDLTKET
ISSSLGEELVYDEKALASISEYFKRTGREFTENNKKQALVLNGATVFANDHGMAPGMGLNKNEKVYILLPGPPKEMKPMY
ISYVEPFLRNFTTGENIYSRVLRFFGIGESQLEVKVQDLIDGQMNPTIAPLANDGEVTLRLTAKHQNADEAAKLIQHMED
LILERVGEFFYGYDQEFLHDKAIELLKKKGLTLACAESLTGGLFGNQVTESAGVSSVFKGGVICYHNDVKQHVLHVTAEV
LSTDGAVSKECARYLAENVKGLLKADIGISFTGVAGPDASEHKEPGTVFVGLAMKDEPTVVFPLNLSGSRQQIRERSVKC
GFYHLYKKLEEI

Nucleotide


Download         Length: 1239 bp        

>NTDB_id=663609 MNO09_RS11185 WP_088107341.1 1670335..1671573(+) (cinA) [Bacillus sp. N5-665]
ATGAATGCTGAAATTATTGCGGTTGGAACTGAATTATTACTTGGACAAATTGCAAATACAAATGCCCAGTTTTTATCTGA
AAAGTTAGCTTCAATCGGAATTAATGTGTACTACCATACTGTAGTTGGAGATAATAACAAGCGATTACAGCAGGCGATTG
AAGTTGCAGAAGAACGTGCTGATATACTTATTTTCACAGGTGGATTAGGCCCGACAAAAGATGATTTGACGAAAGAAACG
ATATCTTCTAGTTTGGGTGAAGAGCTTGTGTATGATGAAAAGGCATTAGCATCGATAAGCGAGTACTTTAAGCGTACAGG
TCGCGAGTTCACAGAGAATAATAAAAAGCAAGCGCTCGTTTTGAATGGAGCAACTGTATTTGCGAATGATCACGGCATGG
CACCTGGTATGGGGCTAAATAAGAACGAGAAAGTTTATATTTTATTACCAGGACCACCGAAAGAGATGAAGCCGATGTAT
ATAAGTTATGTAGAGCCTTTTTTACGTAACTTTACAACAGGAGAAAACATTTATTCTCGTGTGCTTCGCTTTTTCGGGAT
TGGGGAATCACAATTAGAAGTGAAAGTTCAAGATTTAATTGATGGACAAATGAACCCGACAATCGCCCCCCTTGCGAATG
ATGGAGAAGTGACACTACGTTTAACTGCCAAACATCAAAATGCTGATGAAGCGGCGAAACTCATTCAGCATATGGAAGAT
TTGATTTTAGAAAGAGTAGGAGAATTTTTCTACGGGTATGATCAAGAGTTTCTGCATGATAAGGCGATAGAGTTATTGAA
GAAAAAAGGATTAACTTTAGCGTGTGCAGAAAGTTTAACCGGTGGTCTCTTCGGCAATCAAGTAACAGAAAGTGCTGGTG
TGTCTTCAGTATTTAAAGGCGGTGTCATTTGTTATCATAATGATGTGAAGCAACATGTTTTACATGTAACTGCGGAAGTG
TTGTCTACTGATGGTGCAGTTAGTAAAGAATGTGCTCGTTATCTTGCTGAAAATGTTAAGGGCTTATTAAAAGCGGATAT
CGGAATTAGTTTCACTGGGGTAGCAGGACCGGATGCTTCAGAACATAAAGAGCCGGGAACAGTATTCGTTGGATTGGCGA
TGAAGGATGAACCAACTGTAGTCTTTCCTCTTAATTTAAGTGGAAGTCGTCAACAAATTAGGGAACGTTCGGTGAAATGT
GGATTTTATCATTTATATAAAAAGCTAGAAGAGATATAA

Domains

Predicted by InterproScan.

Damage-inducible protein CinA KH domain (CinA_KH)

(179-252)

Probable molybdopterin binding domain (MoCF_biosynth)

(5-169)

Competence-damaged protein (CinA)

(257-408)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

57.767

100

0.578
  cinA Streptococcus pneumoniae TIGR4

47.017

100

0.478
  cinA Streptococcus mitis SK321

46.778

100

0.476
  cinA Streptococcus pneumoniae Rx1

46.539

100

0.473
  cinA Streptococcus pneumoniae R6

46.539

100

0.473
  cinA Streptococcus pneumoniae D39

46.301

100

0.471
  cinA Streptococcus mitis NCTC 12261

45.823

100

0.466
  cinA Streptococcus mutans UA159

45.074

98.544

0.444
  cinA Streptococcus suis isolate S10

40.741

91.748

0.374